Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.04■□□□□ 0.96
SNX27Q96L92 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SNX27Q96L92 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.04■□□□□ 0.96
SNX27Q96L92 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 GPALPP1-207ENST00000611650 899 ntBASIC21.04■□□□□ 0.96
SNX27Q96L92 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SNX27Q96L92 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.04■□□□□ 0.96
SNX27Q96L92 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SNX27Q96L92 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SNX27Q96L92 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX27Q96L92 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNX27Q96L92 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX27Q96L92 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX27Q96L92 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SNX27Q96L92 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SNX27Q96L92 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX27Q96L92 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.03■□□□□ 0.96
SNX27Q96L92 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
SNX27Q96L92 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.03■□□□□ 0.96
SNX27Q96L92 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SNX27Q96L92 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX27Q96L92 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SNX27Q96L92 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.03■□□□□ 0.96
SNX27Q96L92 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNX27Q96L92 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNX27Q96L92 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNX27Q96L92 RCC2P6-201ENST00000526625 1557 ntBASIC21.02■□□□□ 0.96
SNX27Q96L92 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SNX27Q96L92 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNX27Q96L92 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SNX27Q96L92 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNX27Q96L92 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SNX27Q96L92 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.02■□□□□ 0.96
SNX27Q96L92 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SNX27Q96L92 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.02■□□□□ 0.96
SNX27Q96L92 Z85996.1-201ENST00000494644 937 ntBASIC21.02■□□□□ 0.96
SNX27Q96L92 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNX27Q96L92 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.02■□□□□ 0.96
SNX27Q96L92 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.02■□□□□ 0.96
SNX27Q96L92 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.02■□□□□ 0.95
SNX27Q96L92 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SNX27Q96L92 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNX27Q96L92 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.01■□□□□ 0.95
SNX27Q96L92 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.01■□□□□ 0.95
SNX27Q96L92 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SNX27Q96L92 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
SNX27Q96L92 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.01■□□□□ 0.95
SNX27Q96L92 MMP23A-201ENST00000234610 1017 ntBASIC21.01■□□□□ 0.95
SNX27Q96L92 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 KRT126P-201ENST00000549467 1181 ntBASIC21.01■□□□□ 0.95
SNX27Q96L92 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SNX27Q96L92 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SNX27Q96L92 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.01■□□□□ 0.95
SNX27Q96L92 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.01■□□□□ 0.95
SNX27Q96L92 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNX27Q96L92 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 LINC01465-201ENST00000408887 1940 ntBASIC21■□□□□ 0.95
SNX27Q96L92 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21■□□□□ 0.95
SNX27Q96L92 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21■□□□□ 0.95
SNX27Q96L92 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21■□□□□ 0.95
SNX27Q96L92 DGCR10-201ENST00000609839 495 ntBASIC21■□□□□ 0.95
SNX27Q96L92 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21■□□□□ 0.95
SNX27Q96L92 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SNX27Q96L92 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 KRT8P9-201ENST00000558927 1449 ntBASIC21■□□□□ 0.95
SNX27Q96L92 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21■□□□□ 0.95
SNX27Q96L92 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SNX27Q96L92 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21■□□□□ 0.95
SNX27Q96L92 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNX27Q96L92 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms