Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPDL1Q96EA4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.14■□□□□ 0.66
SPDL1Q96EA4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPDL1Q96EA4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 AC019069.1-201ENST00000610008 1333 ntBASIC19.14■□□□□ 0.65
SPDL1Q96EA4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPDL1Q96EA4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 TERF1P2-201ENST00000583350 1212 ntBASIC19.13■□□□□ 0.65
SPDL1Q96EA4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 TNRC18P3-201ENST00000441896 2691 ntBASIC19.13■□□□□ 0.65
SPDL1Q96EA4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDL1Q96EA4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 AC097381.1-201ENST00000429019 1296 ntBASIC19.12■□□□□ 0.65
SPDL1Q96EA4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPDL1Q96EA4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 PGM5P4-201ENST00000421970 445 ntBASIC19.11■□□□□ 0.65
SPDL1Q96EA4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 AC123595.1-201ENST00000440769 1046 ntBASIC19.11■□□□□ 0.65
SPDL1Q96EA4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.11■□□□□ 0.65
SPDL1Q96EA4 AL356652.1-201ENST00000615962 565 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms