Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 AL691432.3-201ENST00000621860 400 ntBASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
U2AF1L4Q8WU68 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 AC011558.1-201ENST00000623459 338 ntBASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
U2AF1L4Q8WU68 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 AC092667.1-201ENST00000434301 2586 ntBASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
U2AF1L4Q8WU68 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 AC131212.4-201ENST00000623606 975 ntBASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
U2AF1L4Q8WU68 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 CCR12P-201ENST00000446203 998 ntBASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 AP000692.2-201ENST00000608391 879 ntBASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 AC130371.2-201ENST00000619443 611 ntBASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 AC141257.4-201ENST00000634557 245 ntBASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 AC136944.6-201ENST00000634818 245 ntBASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms