Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 AIRN-201ENST00000601203 4374 ntBASIC20.95■□□□□ 0.94
BEST2Q8NFU1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 ECEL1P3-201ENST00000427961 737 ntBASIC20.95■□□□□ 0.94
BEST2Q8NFU1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 AC116562.2-201ENST00000507042 360 ntBASIC20.95■□□□□ 0.94
BEST2Q8NFU1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
BEST2Q8NFU1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 FSCN1P1-201ENST00000568912 1481 ntBASIC20.94■□□□□ 0.94
BEST2Q8NFU1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
BEST2Q8NFU1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
BEST2Q8NFU1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 UNC93B2-201ENST00000285383 730 ntBASIC20.92■□□□□ 0.94
BEST2Q8NFU1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 AC087499.1-201ENST00000418141 1075 ntBASIC20.92■□□□□ 0.94
BEST2Q8NFU1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 MIR6786-201ENST00000616843 113 ntBASIC20.92■□□□□ 0.94
BEST2Q8NFU1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms