Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 AC112482.1-201ENST00000492080 688 ntBASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 PTBP1P-201ENST00000554374 1601 ntBASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HMCN2Q8NDA2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 AC104109.2-201ENST00000602919 1418 ntBASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 KRT18P28-201ENST00000453838 1332 ntBASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.94□□□□□ -0.66
HMCN2Q8NDA2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 HLA-F-220ENST00000434407 884 ntBASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 TFP1-202ENST00000475455 1573 ntBASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 SPCS2P1-201ENST00000561636 679 ntBASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC10.93□□□□□ -0.66
HMCN2Q8NDA2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC10.92□□□□□ -0.66
HMCN2Q8NDA2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms