Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC27.15■■□□□ 1.94
XRN1Q8IZH2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC27.15■■□□□ 1.94
XRN1Q8IZH2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
XRN1Q8IZH2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC27.15■■□□□ 1.94
XRN1Q8IZH2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
XRN1Q8IZH2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC27.14■■□□□ 1.94
XRN1Q8IZH2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
XRN1Q8IZH2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
XRN1Q8IZH2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 WWC2-AS2-201ENST00000578387 2183 ntBASIC27.13■■□□□ 1.93
XRN1Q8IZH2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
XRN1Q8IZH2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 AC111152.3-201ENST00000569699 673 ntBASIC27.12■■□□□ 1.93
XRN1Q8IZH2 MIR3180-1-201ENST00000580374 94 ntBASIC27.12■■□□□ 1.93
XRN1Q8IZH2 RN7SL510P-201ENST00000581311 263 ntBASIC27.12■■□□□ 1.93
XRN1Q8IZH2 MIR3180-3-201ENST00000584616 94 ntBASIC27.12■■□□□ 1.93
XRN1Q8IZH2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 FGF14-AS2-201ENST00000606448 1074 ntBASIC27.12■■□□□ 1.93
XRN1Q8IZH2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC27.12■■□□□ 1.93
XRN1Q8IZH2 TBC1D3P2-202ENST00000577902 1649 ntBASIC27.12■■□□□ 1.93
XRN1Q8IZH2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
XRN1Q8IZH2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
XRN1Q8IZH2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 AC140113.3-201ENST00000605663 199 ntBASIC27.1■■□□□ 1.93
XRN1Q8IZH2 AC092119.3-201ENST00000612618 583 ntBASIC27.1■■□□□ 1.93
XRN1Q8IZH2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 KRT8P10-201ENST00000450021 1447 ntBASIC27.1■■□□□ 1.93
XRN1Q8IZH2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
XRN1Q8IZH2 SMG8-203ENST00000578922 2178 ntBASIC27.09■■□□□ 1.93
XRN1Q8IZH2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms