Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 TSPY17P-201ENST00000450329 467 ntBASIC24.1■■□□□ 1.45
DDX60Q8IY21 CKBP1-201ENST00000565489 1086 ntBASIC24.1■■□□□ 1.45
DDX60Q8IY21 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX60Q8IY21 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
DDX60Q8IY21 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX60Q8IY21 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.09■■□□□ 1.45
DDX60Q8IY21 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX60Q8IY21 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.09■■□□□ 1.45
DDX60Q8IY21 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.09■■□□□ 1.45
DDX60Q8IY21 AC116562.4-202ENST00000641738 218 ntBASIC24.09■■□□□ 1.45
DDX60Q8IY21 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX60Q8IY21 KRT8P11-201ENST00000409686 1436 ntBASIC24.09■■□□□ 1.45
DDX60Q8IY21 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX60Q8IY21 AC099778.1-201ENST00000568593 1911 ntBASIC24.08■■□□□ 1.45
DDX60Q8IY21 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.08■■□□□ 1.45
DDX60Q8IY21 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.08■■□□□ 1.45
DDX60Q8IY21 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
DDX60Q8IY21 AC141257.4-201ENST00000634557 245 ntBASIC24.08■■□□□ 1.45
DDX60Q8IY21 AC136944.6-201ENST00000634818 245 ntBASIC24.08■■□□□ 1.45
DDX60Q8IY21 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX60Q8IY21 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
DDX60Q8IY21 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.08■■□□□ 1.44
DDX60Q8IY21 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
DDX60Q8IY21 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
DDX60Q8IY21 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.07■■□□□ 1.44
DDX60Q8IY21 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX60Q8IY21 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
DDX60Q8IY21 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
DDX60Q8IY21 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX60Q8IY21 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
DDX60Q8IY21 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.07■■□□□ 1.44
DDX60Q8IY21 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX60Q8IY21 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DDX60Q8IY21 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX60Q8IY21 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DDX60Q8IY21 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX60Q8IY21 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX60Q8IY21 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX60Q8IY21 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.07■■□□□ 1.44
DDX60Q8IY21 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX60Q8IY21 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX60Q8IY21 TCF3P1-201ENST00000423021 1937 ntBASIC24.06■■□□□ 1.44
DDX60Q8IY21 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX60Q8IY21 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX60Q8IY21 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 AC087388.1-201ENST00000571370 1112 ntBASIC24.06■■□□□ 1.44
DDX60Q8IY21 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX60Q8IY21 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX60Q8IY21 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX60Q8IY21 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX60Q8IY21 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX60Q8IY21 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX60Q8IY21 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DDX60Q8IY21 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX60Q8IY21 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DDX60Q8IY21 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.05■■□□□ 1.44
DDX60Q8IY21 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.05■■□□□ 1.44
DDX60Q8IY21 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX60Q8IY21 AL353719.1-201ENST00000566847 864 ntBASIC24.05■■□□□ 1.44
DDX60Q8IY21 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX60Q8IY21 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
DDX60Q8IY21 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
DDX60Q8IY21 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DDX60Q8IY21 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
DDX60Q8IY21 AL031133.1-201ENST00000406807 723 ntBASIC24.04■■□□□ 1.44
DDX60Q8IY21 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.04■■□□□ 1.44
DDX60Q8IY21 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.04■■□□□ 1.44
DDX60Q8IY21 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 AC008622.2-201ENST00000617006 1229 ntBASIC24.04■■□□□ 1.44
DDX60Q8IY21 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms