Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 PCED1CP-201ENST00000419887 785 ntBASIC20.64■□□□□ 0.89
RNF135Q8IUD6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 AC093458.2-201ENST00000623150 629 ntBASIC20.64■□□□□ 0.89
RNF135Q8IUD6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF135Q8IUD6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RNF135Q8IUD6 SLC25A24-204ENST00000569674 2357 ntBASIC20.63■□□□□ 0.89
RNF135Q8IUD6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF135Q8IUD6 KRT8P36-201ENST00000489121 1440 ntBASIC20.61■□□□□ 0.89
RNF135Q8IUD6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 TSPY5P-201ENST00000426936 936 ntBASIC20.61■□□□□ 0.89
RNF135Q8IUD6 FAM207BP-201ENST00000447172 505 ntBASIC20.61■□□□□ 0.89
RNF135Q8IUD6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 AC092647.4-201ENST00000457211 535 ntBASIC20.61■□□□□ 0.89
RNF135Q8IUD6 AC097488.1-201ENST00000507834 756 ntBASIC20.61■□□□□ 0.89
RNF135Q8IUD6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 DGCR10-201ENST00000609839 495 ntBASIC20.61■□□□□ 0.89
RNF135Q8IUD6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF135Q8IUD6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.6■□□□□ 0.89
RNF135Q8IUD6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 HMGA1P5-201ENST00000412453 271 ntBASIC20.6■□□□□ 0.89
RNF135Q8IUD6 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.6■□□□□ 0.89
RNF135Q8IUD6 YBX1P2-201ENST00000489612 999 ntBASIC20.6■□□□□ 0.89
RNF135Q8IUD6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 FAM86EP-206ENST00000510506 987 ntBASIC20.6■□□□□ 0.89
RNF135Q8IUD6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF135Q8IUD6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms