Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM4Q86VH4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LRRTM4Q86VH4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LRRTM4Q86VH4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM4Q86VH4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRTM4Q86VH4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM4Q86VH4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LRRTM4Q86VH4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 NUDT16P1-203ENST00000513809 620 ntBASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 AC131212.4-201ENST00000623606 975 ntBASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 AL031985.4-201ENST00000642138 673 ntBASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRRTM4Q86VH4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 AP003071.4-201ENST00000562276 1284 ntBASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRTM4Q86VH4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 AC026271.3-201ENST00000571884 352 ntBASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM4Q86VH4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 AC073130.3-201ENST00000624389 2278 ntBASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 AC004980.1-204ENST00000429707 299 ntBASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms