Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC239809.2-201ENST00000415381 517 ntBASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.77■□□□□ 0.27
COLCA1Q6ZS62 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 KRASP1-201ENST00000407852 552 ntBASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 KRT16P5-201ENST00000455284 522 ntBASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLCA1Q6ZS62 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 AC110285.5-201ENST00000611501 352 ntBASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COLCA1Q6ZS62 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COLCA1Q6ZS62 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms