Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.98■■□□□ 1.11
SHC4Q6S5L8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 YBX1P10-201ENST00000444752 975 ntBASIC21.97■■□□□ 1.11
SHC4Q6S5L8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.97■■□□□ 1.11
SHC4Q6S5L8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 AC008687.6-201ENST00000596318 630 ntBASIC21.96■■□□□ 1.11
SHC4Q6S5L8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 KRT8P8-201ENST00000434750 1448 ntBASIC21.96■■□□□ 1.11
SHC4Q6S5L8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC4Q6S5L8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
SHC4Q6S5L8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SHC4Q6S5L8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SHC4Q6S5L8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.11
SHC4Q6S5L8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 AL121829.2-201ENST00000620908 328 ntBASIC21.95■■□□□ 1.1
SHC4Q6S5L8 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.95■■□□□ 1.1
SHC4Q6S5L8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC4Q6S5L8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 KRT18P16-201ENST00000510337 1294 ntBASIC21.94■■□□□ 1.1
SHC4Q6S5L8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC4Q6S5L8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms