Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL13A1Q5TAT6 AC211486.1-202ENST00000416371 468 ntBASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 AC211476.1-201ENST00000503899 468 ntBASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 AC063926.2-201ENST00000623766 1308 ntBASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL13A1Q5TAT6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 AP006288.1-201ENST00000446065 395 ntBASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 AC018712.1-201ENST00000455767 687 ntBASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 AC145285.3-201ENST00000564603 959 ntBASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 AC106028.4-201ENST00000614509 607 ntBASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 AL355877.3-201ENST00000622820 899 ntBASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.02■■□□□ 1.12
COL13A1Q5TAT6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.02■■□□□ 1.11
COL13A1Q5TAT6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.02■■□□□ 1.11
COL13A1Q5TAT6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
COL13A1Q5TAT6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 AC233702.3-201ENST00000578656 1387 ntBASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 AC020928.2-201ENST00000588717 2197 ntBASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 AC092474.2-201ENST00000424288 719 ntBASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 DUX4L17-201ENST00000557360 1267 ntBASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 RNF126P1-202ENST00000569893 925 ntBASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 FAM215A-202ENST00000632077 792 ntBASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 ANOS2P-203ENST00000472227 1816 ntBASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL13A1Q5TAT6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
COL13A1Q5TAT6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
COL13A1Q5TAT6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22■■□□□ 1.11
COL13A1Q5TAT6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22■■□□□ 1.11
COL13A1Q5TAT6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22■■□□□ 1.11
COL13A1Q5TAT6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22■■□□□ 1.11
COL13A1Q5TAT6 AC138761.1-201ENST00000584393 385 ntBASIC22■■□□□ 1.11
COL13A1Q5TAT6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22■■□□□ 1.11
COL13A1Q5TAT6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
COL13A1Q5TAT6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL13A1Q5TAT6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 IGHV3-47-201ENST00000425060 335 ntBASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms