Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
COL16A1Q07092 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL16A1Q07092 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
COL16A1Q07092 FAM220CP-201ENST00000395253 831 ntBASIC26.39■■□□□ 1.82
COL16A1Q07092 AC034232.1-201ENST00000506026 1064 ntBASIC26.39■■□□□ 1.82
COL16A1Q07092 AC091304.2-201ENST00000564639 760 ntBASIC26.39■■□□□ 1.82
COL16A1Q07092 AF228730.7-201ENST00000641842 219 ntBASIC26.39■■□□□ 1.82
COL16A1Q07092 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
COL16A1Q07092 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.39■■□□□ 1.82
COL16A1Q07092 C9orf163-202ENST00000624034 2573 ntBASIC26.39■■□□□ 1.82
COL16A1Q07092 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL16A1Q07092 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.39■■□□□ 1.81
COL16A1Q07092 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL16A1Q07092 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
COL16A1Q07092 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL16A1Q07092 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
COL16A1Q07092 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
COL16A1Q07092 AL590627.1-203ENST00000421194 1026 ntBASIC26.39■■□□□ 1.81
COL16A1Q07092 IL11-204ENST00000590625 1028 ntTSL 2 BASIC26.39■■□□□ 1.81
COL16A1Q07092 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC26.39■■□□□ 1.81
COL16A1Q07092 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
COL16A1Q07092 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL16A1Q07092 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL16A1Q07092 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL16A1Q07092 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL16A1Q07092 IL9RP2-201ENST00000423948 1312 ntBASIC26.38■■□□□ 1.81
COL16A1Q07092 AC005229.4-201ENST00000610085 2198 ntBASIC26.38■■□□□ 1.81
COL16A1Q07092 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL16A1Q07092 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.37■■□□□ 1.81
COL16A1Q07092 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
COL16A1Q07092 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC26.37■■□□□ 1.81
COL16A1Q07092 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC26.37■■□□□ 1.81
COL16A1Q07092 LINC00265-3P-201ENST00000447588 903 ntBASIC26.37■■□□□ 1.81
COL16A1Q07092 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC26.37■■□□□ 1.81
COL16A1Q07092 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC26.37■■□□□ 1.81
COL16A1Q07092 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC26.37■■□□□ 1.81
COL16A1Q07092 HOTTIP_1.1-201ENST00000620415 57 ntBASIC26.37■■□□□ 1.81
COL16A1Q07092 TP73-AS1-207ENST00000624167 988 ntBASIC26.37■■□□□ 1.81
COL16A1Q07092 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL16A1Q07092 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL16A1Q07092 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL16A1Q07092 KRT16P6-202ENST00000425692 1426 ntBASIC26.37■■□□□ 1.81
COL16A1Q07092 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL16A1Q07092 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL16A1Q07092 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.37■■□□□ 1.81
COL16A1Q07092 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL16A1Q07092 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC26.36■■□□□ 1.81
COL16A1Q07092 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC26.36■■□□□ 1.81
COL16A1Q07092 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC26.36■■□□□ 1.81
COL16A1Q07092 TOB2P1-201ENST00000469761 992 ntBASIC26.36■■□□□ 1.81
COL16A1Q07092 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC26.36■■□□□ 1.81
COL16A1Q07092 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL16A1Q07092 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
COL16A1Q07092 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL16A1Q07092 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL16A1Q07092 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL16A1Q07092 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL16A1Q07092 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC26.36■■□□□ 1.81
COL16A1Q07092 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC26.36■■□□□ 1.81
COL16A1Q07092 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL16A1Q07092 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL16A1Q07092 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL16A1Q07092 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL16A1Q07092 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC26.35■■□□□ 1.81
COL16A1Q07092 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC26.35■■□□□ 1.81
COL16A1Q07092 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.35■■□□□ 1.81
COL16A1Q07092 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.35■■□□□ 1.81
COL16A1Q07092 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC26.35■■□□□ 1.81
COL16A1Q07092 AP000867.3-201ENST00000524675 377 ntBASIC26.35■■□□□ 1.81
COL16A1Q07092 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC26.35■■□□□ 1.81
COL16A1Q07092 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC26.35■■□□□ 1.81
COL16A1Q07092 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL16A1Q07092 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
COL16A1Q07092 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL16A1Q07092 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
COL16A1Q07092 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.35■■□□□ 1.81
COL16A1Q07092 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL16A1Q07092 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC26.34■■□□□ 1.81
COL16A1Q07092 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL16A1Q07092 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL16A1Q07092 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL16A1Q07092 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
COL16A1Q07092 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC26.34■■□□□ 1.81
COL16A1Q07092 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL16A1Q07092 AC092865.5-201ENST00000545435 363 ntBASIC26.34■■□□□ 1.81
COL16A1Q07092 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC26.34■■□□□ 1.81
COL16A1Q07092 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC26.34■■□□□ 1.81
COL16A1Q07092 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL16A1Q07092 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL16A1Q07092 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
COL16A1Q07092 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL16A1Q07092 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL16A1Q07092 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL16A1Q07092 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC26.33■■□□□ 1.81
COL16A1Q07092 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC26.33■■□□□ 1.81
COL16A1Q07092 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL16A1Q07092 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC26.33■■□□□ 1.81
COL16A1Q07092 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.33■■□□□ 1.81
COL16A1Q07092 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC26.33■■□□□ 1.81
COL16A1Q07092 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms