Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC007952.6-201ENST00000573168 2673 ntBASIC18.64■□□□□ 0.57
VSX2P58304 AC003957.1-201ENST00000625108 2673 ntBASIC18.64■□□□□ 0.57
VSX2P58304 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 FAM197Y1-201ENST00000421178 764 ntBASIC18.64■□□□□ 0.57
VSX2P58304 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.64■□□□□ 0.57
VSX2P58304 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.64■□□□□ 0.57
VSX2P58304 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.64■□□□□ 0.57
VSX2P58304 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.64■□□□□ 0.57
VSX2P58304 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
VSX2P58304 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.64■□□□□ 0.57
VSX2P58304 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VSX2P58304 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VSX2P58304 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.63■□□□□ 0.57
VSX2P58304 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 NIFKP9-201ENST00000419265 221 ntBASIC18.63■□□□□ 0.57
VSX2P58304 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.63■□□□□ 0.57
VSX2P58304 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 CD177P1-201ENST00000606252 935 ntBASIC18.63■□□□□ 0.57
VSX2P58304 AL353708.3-201ENST00000610272 989 ntBASIC18.63■□□□□ 0.57
VSX2P58304 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.63■□□□□ 0.57
VSX2P58304 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 KRT8P8-201ENST00000434750 1448 ntBASIC18.63■□□□□ 0.57
VSX2P58304 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VSX2P58304 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VSX2P58304 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
VSX2P58304 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.62■□□□□ 0.57
VSX2P58304 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.62■□□□□ 0.57
VSX2P58304 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.62■□□□□ 0.57
VSX2P58304 CR392000.1-201ENST00000624770 1228 ntBASIC18.62■□□□□ 0.57
VSX2P58304 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VSX2P58304 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VSX2P58304 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.62■□□□□ 0.57
VSX2P58304 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.62■□□□□ 0.57
VSX2P58304 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX2P58304 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VSX2P58304 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VSX2P58304 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VSX2P58304 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.61■□□□□ 0.57
VSX2P58304 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VSX2P58304 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 KSR1P1-201ENST00000446298 240 ntBASIC18.61■□□□□ 0.57
VSX2P58304 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VSX2P58304 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.61■□□□□ 0.57
VSX2P58304 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.61■□□□□ 0.57
VSX2P58304 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.61■□□□□ 0.57
VSX2P58304 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.61■□□□□ 0.57
VSX2P58304 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VSX2P58304 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.61■□□□□ 0.57
VSX2P58304 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.61■□□□□ 0.57
VSX2P58304 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX2P58304 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms