Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC4P55056 REXO1L10P-201ENST00000615707 1290 ntBASIC14.28□□□□□ -0.12
APOC4P55056 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC4P55056 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC4P55056 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
APOC4P55056 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.27□□□□□ -0.12
APOC4P55056 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
APOC4P55056 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.27□□□□□ -0.12
APOC4P55056 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.27□□□□□ -0.12
APOC4P55056 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.27□□□□□ -0.12
APOC4P55056 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC4P55056 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
APOC4P55056 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 AC116562.2-201ENST00000507042 360 ntBASIC14.27□□□□□ -0.13
APOC4P55056 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
APOC4P55056 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
APOC4P55056 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
APOC4P55056 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
APOC4P55056 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC4P55056 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
APOC4P55056 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
APOC4P55056 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.26□□□□□ -0.13
APOC4P55056 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC4P55056 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
APOC4P55056 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.26□□□□□ -0.13
APOC4P55056 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.26□□□□□ -0.13
APOC4P55056 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOC4P55056 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
APOC4P55056 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC4P55056 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC4P55056 RBM17P1-201ENST00000453646 1190 ntBASIC14.26□□□□□ -0.13
APOC4P55056 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.26□□□□□ -0.13
APOC4P55056 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.26□□□□□ -0.13
APOC4P55056 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC4P55056 MIR6786-201ENST00000616843 113 ntBASIC14.26□□□□□ -0.13
APOC4P55056 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.26□□□□□ -0.13
APOC4P55056 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 AL162377.1-201ENST00000618844 1793 ntBASIC14.26□□□□□ -0.13
APOC4P55056 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOC4P55056 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC4P55056 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
APOC4P55056 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
APOC4P55056 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOC4P55056 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC4P55056 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC4P55056 AC211429.1-201ENST00000415277 523 ntBASIC14.25□□□□□ -0.13
APOC4P55056 AC087499.1-201ENST00000418141 1075 ntBASIC14.25□□□□□ -0.13
APOC4P55056 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.25□□□□□ -0.13
APOC4P55056 AC133561.5-201ENST00000635547 218 ntBASIC14.25□□□□□ -0.13
APOC4P55056 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC4P55056 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOC4P55056 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
APOC4P55056 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC4P55056 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOC4P55056 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms