Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.12■□□□□ 0.49
PSMD4P55036 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PSMD4P55036 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
PSMD4P55036 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PSMD4P55036 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PSMD4P55036 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PSMD4P55036 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PSMD4P55036 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PSMD4P55036 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PSMD4P55036 AC090340.1-201ENST00000620778 4980 ntBASIC18.12■□□□□ 0.49
PSMD4P55036 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.11■□□□□ 0.49
PSMD4P55036 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.11■□□□□ 0.49
PSMD4P55036 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 POU5F1P3-201ENST00000428824 1078 ntBASIC18.11■□□□□ 0.49
PSMD4P55036 FAM201B-201ENST00000458407 597 ntBASIC18.11■□□□□ 0.49
PSMD4P55036 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.11■□□□□ 0.49
PSMD4P55036 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.11■□□□□ 0.49
PSMD4P55036 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.11■□□□□ 0.49
PSMD4P55036 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.11■□□□□ 0.49
PSMD4P55036 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.11■□□□□ 0.49
PSMD4P55036 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PSMD4P55036 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PSMD4P55036 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.11■□□□□ 0.49
PSMD4P55036 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.11■□□□□ 0.49
PSMD4P55036 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PSMD4P55036 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.11■□□□□ 0.49
PSMD4P55036 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.11■□□□□ 0.49
PSMD4P55036 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.11■□□□□ 0.49
PSMD4P55036 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.1■□□□□ 0.49
PSMD4P55036 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PSMD4P55036 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.1■□□□□ 0.49
PSMD4P55036 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.1■□□□□ 0.49
PSMD4P55036 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.1■□□□□ 0.49
PSMD4P55036 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.1■□□□□ 0.49
PSMD4P55036 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.1■□□□□ 0.49
PSMD4P55036 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.1■□□□□ 0.49
PSMD4P55036 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.1■□□□□ 0.49
PSMD4P55036 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.1■□□□□ 0.49
PSMD4P55036 AC006058.3-201ENST00000606217 1069 ntBASIC18.1■□□□□ 0.49
PSMD4P55036 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PSMD4P55036 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PSMD4P55036 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.1■□□□□ 0.49
PSMD4P55036 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.09■□□□□ 0.49
PSMD4P55036 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.09■□□□□ 0.49
PSMD4P55036 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.09■□□□□ 0.49
PSMD4P55036 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.09■□□□□ 0.49
PSMD4P55036 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.09■□□□□ 0.49
PSMD4P55036 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.09■□□□□ 0.49
PSMD4P55036 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 AC004264.1-201ENST00000608354 794 ntBASIC18.09■□□□□ 0.49
PSMD4P55036 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 AC007952.6-201ENST00000573168 2673 ntBASIC18.09■□□□□ 0.49
PSMD4P55036 AC003957.1-201ENST00000625108 2673 ntBASIC18.09■□□□□ 0.49
PSMD4P55036 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PSMD4P55036 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PSMD4P55036 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.09■□□□□ 0.49
PSMD4P55036 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PSMD4P55036 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.08■□□□□ 0.49
PSMD4P55036 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
PSMD4P55036 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PSMD4P55036 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.08■□□□□ 0.49
PSMD4P55036 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms