Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.51■□□□□ 0.87
CLCN4P51793 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCN4P51793 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.5■□□□□ 0.87
CLCN4P51793 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCN4P51793 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.5■□□□□ 0.87
CLCN4P51793 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.5■□□□□ 0.87
CLCN4P51793 AL160286.2-201ENST00000567150 934 ntBASIC20.5■□□□□ 0.87
CLCN4P51793 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CLCN4P51793 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.5■□□□□ 0.87
CLCN4P51793 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN4P51793 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CLCN4P51793 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN4P51793 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN4P51793 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN4P51793 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN4P51793 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN4P51793 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN4P51793 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLCN4P51793 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.49■□□□□ 0.87
CLCN4P51793 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.49■□□□□ 0.87
CLCN4P51793 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN4P51793 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CLCN4P51793 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN4P51793 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
CLCN4P51793 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLCN4P51793 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN4P51793 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN4P51793 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.49■□□□□ 0.87
CLCN4P51793 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
CLCN4P51793 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN4P51793 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCN4P51793 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 AP001271.2-201ENST00000624018 1556 ntBASIC20.48■□□□□ 0.87
CLCN4P51793 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCN4P51793 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCN4P51793 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.48■□□□□ 0.87
CLCN4P51793 AC092647.4-201ENST00000457211 535 ntBASIC20.48■□□□□ 0.87
CLCN4P51793 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.48■□□□□ 0.87
CLCN4P51793 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.48■□□□□ 0.87
CLCN4P51793 AC011558.1-201ENST00000623459 338 ntBASIC20.48■□□□□ 0.87
CLCN4P51793 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CLCN4P51793 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLCN4P51793 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.48■□□□□ 0.87
CLCN4P51793 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN4P51793 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.47■□□□□ 0.87
CLCN4P51793 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCN4P51793 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCN4P51793 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CLCN4P51793 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
CLCN4P51793 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN4P51793 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCN4P51793 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.46■□□□□ 0.87
CLCN4P51793 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 CA15P1-201ENST00000481698 905 ntBASIC20.46■□□□□ 0.87
CLCN4P51793 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCN4P51793 AL512604.3-201ENST00000569583 964 ntBASIC20.46■□□□□ 0.87
CLCN4P51793 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLCN4P51793 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCN4P51793 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN4P51793 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms