Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.51■■□□□ 1.03
RFC5P40937 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.51■■□□□ 1.03
RFC5P40937 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.51■■□□□ 1.03
RFC5P40937 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RFC5P40937 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RFC5P40937 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.51■■□□□ 1.03
RFC5P40937 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.51■■□□□ 1.03
RFC5P40937 AL160286.2-201ENST00000567150 934 ntBASIC21.51■■□□□ 1.03
RFC5P40937 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RFC5P40937 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RFC5P40937 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.51■■□□□ 1.03
RFC5P40937 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RFC5P40937 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RFC5P40937 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
RFC5P40937 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RFC5P40937 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC5P40937 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC5P40937 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC5P40937 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC5P40937 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC5P40937 RCC2P6-201ENST00000526625 1557 ntBASIC21.5■■□□□ 1.03
RFC5P40937 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC5P40937 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC5P40937 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RFC5P40937 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC5P40937 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC5P40937 AC011506.1-201ENST00000474329 610 ntBASIC21.5■■□□□ 1.03
RFC5P40937 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC5P40937 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC5P40937 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.5■■□□□ 1.03
RFC5P40937 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.5■■□□□ 1.03
RFC5P40937 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.5■■□□□ 1.03
RFC5P40937 DGCR10-201ENST00000609839 495 ntBASIC21.5■■□□□ 1.03
RFC5P40937 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.5■■□□□ 1.03
RFC5P40937 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC5P40937 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC5P40937 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.5■■□□□ 1.03
RFC5P40937 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
RFC5P40937 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RFC5P40937 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.49■■□□□ 1.03
RFC5P40937 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RFC5P40937 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
RFC5P40937 Z85996.1-201ENST00000494644 937 ntBASIC21.49■■□□□ 1.03
RFC5P40937 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.49■■□□□ 1.03
RFC5P40937 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.49■■□□□ 1.03
RFC5P40937 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 AC079598.2-202ENST00000546624 1451 ntBASIC21.49■■□□□ 1.03
RFC5P40937 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.49■■□□□ 1.03
RFC5P40937 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.49■■□□□ 1.03
RFC5P40937 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RFC5P40937 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RFC5P40937 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.49■■□□□ 1.03
RFC5P40937 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC5P40937 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.48■■□□□ 1.03
RFC5P40937 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.48■■□□□ 1.03
RFC5P40937 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RFC5P40937 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.48■■□□□ 1.03
RFC5P40937 MMP23A-201ENST00000234610 1017 ntBASIC21.48■■□□□ 1.03
RFC5P40937 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 AC004951.3-201ENST00000418645 1148 ntBASIC21.48■■□□□ 1.03
RFC5P40937 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.48■■□□□ 1.03
RFC5P40937 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.48■■□□□ 1.03
RFC5P40937 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.48■■□□□ 1.03
RFC5P40937 AP000525.1-201ENST00000608286 694 ntBASIC21.48■■□□□ 1.03
RFC5P40937 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.48■■□□□ 1.03
RFC5P40937 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RFC5P40937 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.48■■□□□ 1.03
RFC5P40937 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFC5P40937 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.47■■□□□ 1.03
RFC5P40937 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RFC5P40937 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.47■■□□□ 1.03
RFC5P40937 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.47■■□□□ 1.03
RFC5P40937 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms