Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
COL15A1P39059 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL15A1P39059 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL15A1P39059 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL15A1P39059 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.74■■□□□ 1.55
COL15A1P39059 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
COL15A1P39059 COPS8-203ENST00000409334 794 ntTSL 5 BASIC24.74■■□□□ 1.55
COL15A1P39059 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.74■■□□□ 1.55
COL15A1P39059 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.74■■□□□ 1.55
COL15A1P39059 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.74■■□□□ 1.55
COL15A1P39059 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.74■■□□□ 1.55
COL15A1P39059 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.74■■□□□ 1.55
COL15A1P39059 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL15A1P39059 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL15A1P39059 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.73■■□□□ 1.55
COL15A1P39059 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.73■■□□□ 1.55
COL15A1P39059 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
COL15A1P39059 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL15A1P39059 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.73■■□□□ 1.55
COL15A1P39059 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.73■■□□□ 1.55
COL15A1P39059 TSPY17P-201ENST00000450329 467 ntBASIC24.73■■□□□ 1.55
COL15A1P39059 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.73■■□□□ 1.55
COL15A1P39059 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
COL15A1P39059 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL15A1P39059 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL15A1P39059 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.72■■□□□ 1.55
COL15A1P39059 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL15A1P39059 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL15A1P39059 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.72■■□□□ 1.55
COL15A1P39059 AC009947.2-201ENST00000444014 672 ntBASIC24.72■■□□□ 1.55
COL15A1P39059 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL15A1P39059 AL353719.1-201ENST00000566847 864 ntBASIC24.72■■□□□ 1.55
COL15A1P39059 AC011558.1-201ENST00000623459 338 ntBASIC24.72■■□□□ 1.55
COL15A1P39059 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL15A1P39059 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL15A1P39059 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL15A1P39059 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL15A1P39059 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.71■■□□□ 1.55
COL15A1P39059 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL15A1P39059 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
COL15A1P39059 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL15A1P39059 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.71■■□□□ 1.55
COL15A1P39059 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.71■■□□□ 1.55
COL15A1P39059 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL15A1P39059 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL15A1P39059 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
COL15A1P39059 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
COL15A1P39059 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.71■■□□□ 1.55
COL15A1P39059 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.71■■□□□ 1.55
COL15A1P39059 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
COL15A1P39059 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
COL15A1P39059 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
COL15A1P39059 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.7■■□□□ 1.55
COL15A1P39059 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.7■■□□□ 1.55
COL15A1P39059 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.7■■□□□ 1.55
COL15A1P39059 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.7■■□□□ 1.55
COL15A1P39059 AL160286.2-201ENST00000567150 934 ntBASIC24.7■■□□□ 1.55
COL15A1P39059 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.7■■□□□ 1.55
COL15A1P39059 AL121956.5-201ENST00000625261 221 ntBASIC24.7■■□□□ 1.55
COL15A1P39059 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.7■■□□□ 1.55
COL15A1P39059 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.7■■□□□ 1.54
COL15A1P39059 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL15A1P39059 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL15A1P39059 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL15A1P39059 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.7■■□□□ 1.54
COL15A1P39059 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.7■■□□□ 1.54
COL15A1P39059 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.7■■□□□ 1.54
COL15A1P39059 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL15A1P39059 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.69■■□□□ 1.54
COL15A1P39059 FAM86EP-206ENST00000510506 987 ntBASIC24.69■■□□□ 1.54
COL15A1P39059 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.69■■□□□ 1.54
COL15A1P39059 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL15A1P39059 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.69■■□□□ 1.54
COL15A1P39059 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.69■■□□□ 1.54
COL15A1P39059 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL15A1P39059 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL15A1P39059 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL15A1P39059 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.69■■□□□ 1.54
COL15A1P39059 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL15A1P39059 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.69■■□□□ 1.54
COL15A1P39059 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.69■■□□□ 1.54
COL15A1P39059 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL15A1P39059 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.68■■□□□ 1.54
COL15A1P39059 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 AL359075.1-203ENST00000462729 1002 ntBASIC24.68■■□□□ 1.54
COL15A1P39059 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.68■■□□□ 1.54
COL15A1P39059 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
COL15A1P39059 CA15P1-201ENST00000481698 905 ntBASIC24.68■■□□□ 1.54
COL15A1P39059 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.68■■□□□ 1.54
COL15A1P39059 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.68■■□□□ 1.54
COL15A1P39059 WDR88-203ENST00000592765 651 ntTSL 5 BASIC24.68■■□□□ 1.54
COL15A1P39059 AL023973.1-201ENST00000624619 620 ntBASIC24.68■■□□□ 1.54
COL15A1P39059 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
COL15A1P39059 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.68■■□□□ 1.54
COL15A1P39059 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms