Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT20P35900 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT20P35900 PTBP1P-201ENST00000554374 1601 ntBASIC18.47■□□□□ 0.55
KRT20P35900 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.47■□□□□ 0.55
KRT20P35900 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT20P35900 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT20P35900 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT20P35900 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT20P35900 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT20P35900 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT20P35900 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT20P35900 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.46■□□□□ 0.55
KRT20P35900 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT20P35900 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.46■□□□□ 0.55
KRT20P35900 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT20P35900 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT20P35900 PNMA6B-201ENST00000538162 1200 ntBASIC18.46■□□□□ 0.55
KRT20P35900 AC005829.2-201ENST00000571422 1056 ntBASIC18.46■□□□□ 0.55
KRT20P35900 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT20P35900 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT20P35900 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT20P35900 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT20P35900 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KRT20P35900 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
KRT20P35900 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
KRT20P35900 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT20P35900 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
KRT20P35900 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.46■□□□□ 0.54
KRT20P35900 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT20P35900 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT20P35900 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT20P35900 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
KRT20P35900 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
KRT20P35900 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT20P35900 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT20P35900 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
KRT20P35900 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRT20P35900 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT20P35900 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT20P35900 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.45■□□□□ 0.54
KRT20P35900 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
KRT20P35900 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
KRT20P35900 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT20P35900 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT20P35900 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
KRT20P35900 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT20P35900 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT20P35900 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT20P35900 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT20P35900 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT20P35900 KRT18P6-201ENST00000555540 1265 ntBASIC18.44■□□□□ 0.54
KRT20P35900 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT20P35900 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT20P35900 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
KRT20P35900 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT20P35900 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT20P35900 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
KRT20P35900 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms