Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CKS2P33552 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS2P33552 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.32□□□□□ -0.12
CKS2P33552 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.31□□□□□ -0.12
CKS2P33552 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CKS2P33552 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.31□□□□□ -0.12
CKS2P33552 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.31□□□□□ -0.12
CKS2P33552 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.31□□□□□ -0.12
CKS2P33552 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.31□□□□□ -0.12
CKS2P33552 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.31□□□□□ -0.12
CKS2P33552 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CKS2P33552 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.31□□□□□ -0.12
CKS2P33552 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CKS2P33552 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.31□□□□□ -0.12
CKS2P33552 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS2P33552 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CKS2P33552 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.3□□□□□ -0.12
CKS2P33552 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.3□□□□□ -0.12
CKS2P33552 AP001271.2-201ENST00000624018 1556 ntBASIC14.3□□□□□ -0.12
CKS2P33552 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CKS2P33552 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.3□□□□□ -0.12
CKS2P33552 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CKS2P33552 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.3□□□□□ -0.12
CKS2P33552 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CKS2P33552 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.3□□□□□ -0.12
CKS2P33552 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.3□□□□□ -0.12
CKS2P33552 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.3□□□□□ -0.12
CKS2P33552 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.3□□□□□ -0.12
CKS2P33552 MIR4466-201ENST00000606121 54 ntBASIC14.3□□□□□ -0.12
CKS2P33552 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 TSPY26P-201ENST00000476365 1326 ntBASIC14.3□□□□□ -0.12
CKS2P33552 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.3□□□□□ -0.12
CKS2P33552 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CKS2P33552 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.3□□□□□ -0.12
CKS2P33552 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS2P33552 PCDHB18P-201ENST00000524813 2368 ntBASIC14.3□□□□□ -0.12
CKS2P33552 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.3□□□□□ -0.12
CKS2P33552 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.29□□□□□ -0.12
CKS2P33552 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CKS2P33552 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CKS2P33552 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 AC090164.3-201ENST00000610780 2143 ntBASIC14.29□□□□□ -0.12
CKS2P33552 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.29□□□□□ -0.12
CKS2P33552 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.29□□□□□ -0.12
CKS2P33552 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.29□□□□□ -0.12
CKS2P33552 PGM5P4-201ENST00000421970 445 ntBASIC14.29□□□□□ -0.12
CKS2P33552 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.29□□□□□ -0.12
CKS2P33552 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms