Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNA3P22001 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNA3P22001 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.96■■□□□ 1.43
KCNA3P22001 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.96■■□□□ 1.43
KCNA3P22001 TSSC2-201ENST00000450217 709 ntBASIC23.96■■□□□ 1.43
KCNA3P22001 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.96■■□□□ 1.43
KCNA3P22001 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.96■■□□□ 1.43
KCNA3P22001 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
KCNA3P22001 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.96■■□□□ 1.43
KCNA3P22001 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KCNA3P22001 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
KCNA3P22001 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.96■■□□□ 1.43
KCNA3P22001 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNA3P22001 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
KCNA3P22001 FP700111.2-201ENST00000619190 1892 ntBASIC23.96■■□□□ 1.43
KCNA3P22001 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
KCNA3P22001 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
KCNA3P22001 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
KCNA3P22001 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.95■■□□□ 1.43
KCNA3P22001 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNA3P22001 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNA3P22001 AP000593.1-201ENST00000393668 712 ntBASIC23.95■■□□□ 1.42
KCNA3P22001 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.95■■□□□ 1.42
KCNA3P22001 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.95■■□□□ 1.42
KCNA3P22001 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.95■■□□□ 1.42
KCNA3P22001 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.95■■□□□ 1.42
KCNA3P22001 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNA3P22001 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNA3P22001 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KCNA3P22001 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNA3P22001 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNA3P22001 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNA3P22001 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNA3P22001 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
KCNA3P22001 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNA3P22001 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.94■■□□□ 1.42
KCNA3P22001 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNA3P22001 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNA3P22001 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.94■■□□□ 1.42
KCNA3P22001 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.94■■□□□ 1.42
KCNA3P22001 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
KCNA3P22001 EMBP1-201ENST00000458200 901 ntBASIC23.94■■□□□ 1.42
KCNA3P22001 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.94■■□□□ 1.42
KCNA3P22001 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.94■■□□□ 1.42
KCNA3P22001 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.94■■□□□ 1.42
KCNA3P22001 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.94■■□□□ 1.42
KCNA3P22001 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.94■■□□□ 1.42
KCNA3P22001 AL031008.1-201ENST00000619963 541 ntBASIC23.94■■□□□ 1.42
KCNA3P22001 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
KCNA3P22001 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNA3P22001 BX119927.1-201ENST00000636596 1552 ntBASIC23.94■■□□□ 1.42
KCNA3P22001 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNA3P22001 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
KCNA3P22001 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.93■■□□□ 1.42
KCNA3P22001 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.93■■□□□ 1.42
KCNA3P22001 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.93■■□□□ 1.42
KCNA3P22001 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
KCNA3P22001 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 AL022342.1-201ENST00000400363 863 ntBASIC23.93■■□□□ 1.42
KCNA3P22001 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.93■■□□□ 1.42
KCNA3P22001 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.93■■□□□ 1.42
KCNA3P22001 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
KCNA3P22001 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.93■■□□□ 1.42
KCNA3P22001 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
KCNA3P22001 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.93■■□□□ 1.42
KCNA3P22001 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.93■■□□□ 1.42
KCNA3P22001 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
KCNA3P22001 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.92■■□□□ 1.42
KCNA3P22001 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KCNA3P22001 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KCNA3P22001 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.92■■□□□ 1.42
KCNA3P22001 NUS1P1-201ENST00000446295 882 ntBASIC23.92■■□□□ 1.42
KCNA3P22001 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.92■■□□□ 1.42
KCNA3P22001 AC011498.5-201ENST00000592027 486 ntBASIC23.92■■□□□ 1.42
KCNA3P22001 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KCNA3P22001 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.92■■□□□ 1.42
KCNA3P22001 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.92■■□□□ 1.42
KCNA3P22001 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.92■■□□□ 1.42
KCNA3P22001 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.92■■□□□ 1.42
KCNA3P22001 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
KCNA3P22001 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.92■■□□□ 1.42
KCNA3P22001 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KCNA3P22001 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
KCNA3P22001 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KCNA3P22001 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.91■■□□□ 1.42
KCNA3P22001 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
KCNA3P22001 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
KCNA3P22001 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.91■■□□□ 1.42
KCNA3P22001 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.91■■□□□ 1.42
KCNA3P22001 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms