Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
COL5A2P05997 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC25.75■■□□□ 1.71
COL5A2P05997 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL5A2P05997 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL5A2P05997 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL5A2P05997 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
COL5A2P05997 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
COL5A2P05997 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC25.74■■□□□ 1.71
COL5A2P05997 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
COL5A2P05997 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL5A2P05997 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL5A2P05997 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL5A2P05997 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL5A2P05997 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.73■■□□□ 1.71
COL5A2P05997 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC25.73■■□□□ 1.71
COL5A2P05997 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC25.73■■□□□ 1.71
COL5A2P05997 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
COL5A2P05997 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL5A2P05997 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 ILF2-202ENST00000368681 726 ntTSL 2 BASIC25.72■■□□□ 1.71
COL5A2P05997 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC25.72■■□□□ 1.71
COL5A2P05997 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC25.72■■□□□ 1.71
COL5A2P05997 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.72■■□□□ 1.71
COL5A2P05997 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC25.72■■□□□ 1.71
COL5A2P05997 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC25.72■■□□□ 1.71
COL5A2P05997 FGF14-AS2-201ENST00000606448 1074 ntBASIC25.72■■□□□ 1.71
COL5A2P05997 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC25.72■■□□□ 1.71
COL5A2P05997 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
COL5A2P05997 HBZP1-201ENST00000354915 429 ntBASIC25.72■■□□□ 1.71
COL5A2P05997 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL5A2P05997 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.72■■□□□ 1.71
COL5A2P05997 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
COL5A2P05997 AC092119.3-201ENST00000612618 583 ntBASIC25.72■■□□□ 1.71
COL5A2P05997 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
COL5A2P05997 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL5A2P05997 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.71■■□□□ 1.71
COL5A2P05997 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL5A2P05997 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
COL5A2P05997 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL5A2P05997 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL5A2P05997 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL5A2P05997 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC25.71■■□□□ 1.71
COL5A2P05997 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC25.71■■□□□ 1.71
COL5A2P05997 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC25.71■■□□□ 1.71
COL5A2P05997 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.71■■□□□ 1.71
COL5A2P05997 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.71■■□□□ 1.71
COL5A2P05997 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC25.71■■□□□ 1.71
COL5A2P05997 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL5A2P05997 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL5A2P05997 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.71■■□□□ 1.71
COL5A2P05997 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL5A2P05997 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
COL5A2P05997 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL5A2P05997 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
COL5A2P05997 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.7■■□□□ 1.7
COL5A2P05997 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL5A2P05997 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL5A2P05997 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC25.7■■□□□ 1.7
COL5A2P05997 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC25.7■■□□□ 1.7
COL5A2P05997 AL645929.1-201ENST00000420084 975 ntBASIC25.7■■□□□ 1.7
COL5A2P05997 PVRIG2P-201ENST00000435460 978 ntBASIC25.7■■□□□ 1.7
COL5A2P05997 PRR29-207ENST00000580752 458 ntTSL 3 BASIC25.7■■□□□ 1.7
COL5A2P05997 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL5A2P05997 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL5A2P05997 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL5A2P05997 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL5A2P05997 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL5A2P05997 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC25.69■■□□□ 1.7
COL5A2P05997 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
COL5A2P05997 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.69■■□□□ 1.7
COL5A2P05997 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
COL5A2P05997 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL5A2P05997 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.68■■□□□ 1.7
COL5A2P05997 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL5A2P05997 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL5A2P05997 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL5A2P05997 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL5A2P05997 FDX1P1-201ENST00000449115 551 ntBASIC25.68■■□□□ 1.7
COL5A2P05997 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC25.68■■□□□ 1.7
COL5A2P05997 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC25.68■■□□□ 1.7
COL5A2P05997 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC25.68■■□□□ 1.7
COL5A2P05997 SKP2-204ENST00000508514 821 ntTSL 3 BASIC25.68■■□□□ 1.7
COL5A2P05997 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms