Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LMNAP02545 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.29■□□□□ 0.84
LMNAP02545 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNAP02545 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LMNAP02545 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNAP02545 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LMNAP02545 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.29■□□□□ 0.84
LMNAP02545 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNAP02545 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LMNAP02545 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNAP02545 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNAP02545 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNAP02545 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNAP02545 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNAP02545 CYP2D8P-201ENST00000433633 1490 ntBASIC20.29■□□□□ 0.84
LMNAP02545 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNAP02545 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNAP02545 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMNAP02545 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LMNAP02545 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNAP02545 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.28■□□□□ 0.84
LMNAP02545 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNAP02545 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.28■□□□□ 0.84
LMNAP02545 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.28■□□□□ 0.84
LMNAP02545 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMNAP02545 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNAP02545 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LMNAP02545 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.28■□□□□ 0.84
LMNAP02545 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
LMNAP02545 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
LMNAP02545 AC010947.1-201ENST00000623454 693 ntBASIC20.28■□□□□ 0.84
LMNAP02545 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMNAP02545 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.28■□□□□ 0.84
LMNAP02545 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNAP02545 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMNAP02545 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LMNAP02545 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
LMNAP02545 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.27■□□□□ 0.84
LMNAP02545 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 LIN28AP1-201ENST00000429574 405 ntBASIC20.27■□□□□ 0.84
LMNAP02545 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.27■□□□□ 0.84
LMNAP02545 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.27■□□□□ 0.84
LMNAP02545 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.27■□□□□ 0.84
LMNAP02545 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.27■□□□□ 0.84
LMNAP02545 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.27■□□□□ 0.84
LMNAP02545 AL358472.4-201ENST00000633140 710 ntBASIC20.27■□□□□ 0.84
LMNAP02545 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNAP02545 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LMNAP02545 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LMNAP02545 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LMNAP02545 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LMNAP02545 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LMNAP02545 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 AC003102.1-202ENST00000563394 1796 ntBASIC20.26■□□□□ 0.83
LMNAP02545 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.26■□□□□ 0.83
LMNAP02545 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.26■□□□□ 0.83
LMNAP02545 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LMNAP02545 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.26■□□□□ 0.83
LMNAP02545 AC026396.1-201ENST00000419388 421 ntBASIC20.26■□□□□ 0.83
LMNAP02545 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.26■□□□□ 0.83
LMNAP02545 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LMNAP02545 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.26■□□□□ 0.83
LMNAP02545 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.26■□□□□ 0.83
LMNAP02545 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.26■□□□□ 0.83
LMNAP02545 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.26■□□□□ 0.83
LMNAP02545 FITM1-202ENST00000559294 800 ntBASIC20.26■□□□□ 0.83
LMNAP02545 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.26■□□□□ 0.83
LMNAP02545 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LMNAP02545 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.26■□□□□ 0.83
LMNAP02545 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMNAP02545 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMNAP02545 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.25■□□□□ 0.83
LMNAP02545 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LMNAP02545 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMNAP02545 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMNAP02545 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.25■□□□□ 0.83
LMNAP02545 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMNAP02545 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMNAP02545 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms