Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRUB2O95900 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
TRUB2O95900 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRUB2O95900 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.42■□□□□ 0.86
TRUB2O95900 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.42■□□□□ 0.86
TRUB2O95900 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRUB2O95900 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.42■□□□□ 0.86
TRUB2O95900 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.42■□□□□ 0.86
TRUB2O95900 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 KRT18P16-201ENST00000510337 1294 ntBASIC20.42■□□□□ 0.86
TRUB2O95900 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.42■□□□□ 0.86
TRUB2O95900 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.42■□□□□ 0.86
TRUB2O95900 AC005332.7-201ENST00000614046 2005 ntBASIC20.42■□□□□ 0.86
TRUB2O95900 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRUB2O95900 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TRUB2O95900 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TRUB2O95900 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.42■□□□□ 0.86
TRUB2O95900 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.41■□□□□ 0.86
TRUB2O95900 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRUB2O95900 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.41■□□□□ 0.86
TRUB2O95900 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRUB2O95900 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB2O95900 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.41■□□□□ 0.86
TRUB2O95900 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.41■□□□□ 0.86
TRUB2O95900 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRUB2O95900 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.4■□□□□ 0.86
TRUB2O95900 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 TUBB8P6-201ENST00000436895 1288 ntBASIC20.4■□□□□ 0.86
TRUB2O95900 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
TRUB2O95900 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.4■□□□□ 0.86
TRUB2O95900 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.4■□□□□ 0.86
TRUB2O95900 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.4■□□□□ 0.86
TRUB2O95900 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TRUB2O95900 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.4■□□□□ 0.86
TRUB2O95900 Z82202.1-201ENST00000623446 1880 ntBASIC20.4■□□□□ 0.86
TRUB2O95900 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.4■□□□□ 0.86
TRUB2O95900 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRUB2O95900 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.4■□□□□ 0.86
TRUB2O95900 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB2O95900 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRUB2O95900 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRUB2O95900 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TRUB2O95900 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TRUB2O95900 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.39■□□□□ 0.85
TRUB2O95900 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.39■□□□□ 0.85
TRUB2O95900 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.39■□□□□ 0.85
TRUB2O95900 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.39■□□□□ 0.85
TRUB2O95900 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRUB2O95900 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
TRUB2O95900 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB2O95900 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.38■□□□□ 0.85
TRUB2O95900 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRUB2O95900 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRUB2O95900 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TRUB2O95900 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.38■□□□□ 0.85
TRUB2O95900 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRUB2O95900 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB2O95900 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB2O95900 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.37■□□□□ 0.85
TRUB2O95900 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB2O95900 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms