Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 TSPY20P-201ENST00000450910 630 ntBASIC17.35■□□□□ 0.37
TRAF3IP2O43734 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 RN7SL471P-201ENST00000580476 299 ntBASIC17.35■□□□□ 0.37
TRAF3IP2O43734 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP2O43734 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 KRASP1-201ENST00000407852 552 ntBASIC17.34■□□□□ 0.37
TRAF3IP2O43734 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 AC007952.6-201ENST00000573168 2673 ntBASIC17.34■□□□□ 0.37
TRAF3IP2O43734 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 AC003957.1-201ENST00000625108 2673 ntBASIC17.34■□□□□ 0.37
TRAF3IP2O43734 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP2O43734 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP2O43734 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 AC124016.1-201ENST00000609552 612 ntBASIC17.33■□□□□ 0.36
TRAF3IP2O43734 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP2O43734 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms