Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA2O43364 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXA2O43364 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXA2O43364 TSPY5P-201ENST00000426936 936 ntBASIC20.87■□□□□ 0.93
HOXA2O43364 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.87■□□□□ 0.93
HOXA2O43364 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXA2O43364 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXA2O43364 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HOXA2O43364 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXA2O43364 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXA2O43364 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA2O43364 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA2O43364 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HOXA2O43364 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA2O43364 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA2O43364 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXA2O43364 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXA2O43364 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXA2O43364 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.86■□□□□ 0.93
HOXA2O43364 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.86■□□□□ 0.93
HOXA2O43364 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA2O43364 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.86■□□□□ 0.93
HOXA2O43364 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.86■□□□□ 0.93
HOXA2O43364 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.86■□□□□ 0.93
HOXA2O43364 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA2O43364 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.86■□□□□ 0.93
HOXA2O43364 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
HOXA2O43364 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.86■□□□□ 0.93
HOXA2O43364 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA2O43364 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA2O43364 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA2O43364 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
HOXA2O43364 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA2O43364 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA2O43364 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXA2O43364 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.85■□□□□ 0.93
HOXA2O43364 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXA2O43364 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXA2O43364 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXA2O43364 KRT8P41-201ENST00000533985 1514 ntBASIC20.85■□□□□ 0.93
HOXA2O43364 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HOXA2O43364 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXA2O43364 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXA2O43364 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.85■□□□□ 0.93
HOXA2O43364 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.85■□□□□ 0.93
HOXA2O43364 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
HOXA2O43364 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXA2O43364 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HOXA2O43364 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HOXA2O43364 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXA2O43364 PRSS44-201ENST00000515154 1146 ntBASIC20.84■□□□□ 0.93
HOXA2O43364 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXA2O43364 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
HOXA2O43364 MYC-208ENST00000641036 567 ntBASIC20.84■□□□□ 0.93
HOXA2O43364 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXA2O43364 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXA2O43364 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HOXA2O43364 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXA2O43364 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HOXA2O43364 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HOXA2O43364 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXA2O43364 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXA2O43364 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXA2O43364 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXA2O43364 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
HOXA2O43364 HOMER2P1-201ENST00000455653 964 ntBASIC20.83■□□□□ 0.93
HOXA2O43364 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXA2O43364 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXA2O43364 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXA2O43364 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
HOXA2O43364 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
HOXA2O43364 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXA2O43364 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXA2O43364 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXA2O43364 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXA2O43364 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HOXA2O43364 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXA2O43364 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXA2O43364 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXA2O43364 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.82■□□□□ 0.92
HOXA2O43364 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXA2O43364 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXA2O43364 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXA2O43364 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXA2O43364 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXA2O43364 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXA2O43364 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HOXA2O43364 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HOXA2O43364 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXA2O43364 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HOXA2O43364 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms