Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK2O43353 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.78■□□□□ 0.76
RIPK2O43353 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK2O43353 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK2O43353 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK2O43353 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RIPK2O43353 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK2O43353 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK2O43353 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.78■□□□□ 0.76
RIPK2O43353 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK2O43353 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RIPK2O43353 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.78■□□□□ 0.76
RIPK2O43353 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.78■□□□□ 0.76
RIPK2O43353 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RIPK2O43353 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK2O43353 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK2O43353 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.78■□□□□ 0.76
RIPK2O43353 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK2O43353 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK2O43353 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.78■□□□□ 0.76
RIPK2O43353 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK2O43353 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK2O43353 AC093525.10-201ENST00000625130 1569 ntBASIC19.78■□□□□ 0.76
RIPK2O43353 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RIPK2O43353 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK2O43353 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK2O43353 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK2O43353 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK2O43353 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.77■□□□□ 0.76
RIPK2O43353 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RIPK2O43353 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.77■□□□□ 0.76
RIPK2O43353 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK2O43353 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK2O43353 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.77■□□□□ 0.76
RIPK2O43353 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK2O43353 CYP2T3P-201ENST00000601990 817 ntBASIC19.77■□□□□ 0.76
RIPK2O43353 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK2O43353 FP475955.4-201ENST00000623131 1990 ntBASIC19.77■□□□□ 0.75
RIPK2O43353 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK2O43353 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK2O43353 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RIPK2O43353 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK2O43353 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK2O43353 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RIPK2O43353 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RIPK2O43353 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.76■□□□□ 0.75
RIPK2O43353 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.76■□□□□ 0.75
RIPK2O43353 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.76■□□□□ 0.75
RIPK2O43353 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RIPK2O43353 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.76■□□□□ 0.75
RIPK2O43353 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.76■□□□□ 0.75
RIPK2O43353 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.76■□□□□ 0.75
RIPK2O43353 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.76■□□□□ 0.75
RIPK2O43353 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK2O43353 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.76■□□□□ 0.75
RIPK2O43353 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RIPK2O43353 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.76■□□□□ 0.75
RIPK2O43353 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK2O43353 Z98044.1-201ENST00000632503 1764 ntBASIC19.75■□□□□ 0.75
RIPK2O43353 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 AC116351.2-201ENST00000606540 1585 ntBASIC19.75■□□□□ 0.75
RIPK2O43353 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK2O43353 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK2O43353 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RIPK2O43353 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RIPK2O43353 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK2O43353 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.75■□□□□ 0.75
RIPK2O43353 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 ZNF815P-204ENST00000434898 1737 ntBASIC19.75■□□□□ 0.75
RIPK2O43353 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.75■□□□□ 0.75
RIPK2O43353 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK2O43353 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK2O43353 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RIPK2O43353 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.74■□□□□ 0.75
RIPK2O43353 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.74■□□□□ 0.75
RIPK2O43353 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms