Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN3O14994 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN3O14994 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.58■□□□□ 0.89
SYN3O14994 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN3O14994 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN3O14994 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN3O14994 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SYN3O14994 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN3O14994 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN3O14994 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.58■□□□□ 0.89
SYN3O14994 FAM87A-204ENST00000613235 858 ntBASIC20.58■□□□□ 0.89
SYN3O14994 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.58■□□□□ 0.89
SYN3O14994 LINC01006-201ENST00000333319 2292 ntBASIC20.58■□□□□ 0.88
SYN3O14994 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN3O14994 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.58■□□□□ 0.88
SYN3O14994 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN3O14994 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SYN3O14994 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SYN3O14994 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SYN3O14994 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SYN3O14994 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.58■□□□□ 0.88
SYN3O14994 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN3O14994 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN3O14994 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.58■□□□□ 0.88
SYN3O14994 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN3O14994 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.57■□□□□ 0.88
SYN3O14994 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN3O14994 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.57■□□□□ 0.88
SYN3O14994 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.57■□□□□ 0.88
SYN3O14994 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SYN3O14994 LIN28AP1-201ENST00000429574 405 ntBASIC20.57■□□□□ 0.88
SYN3O14994 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.57■□□□□ 0.88
SYN3O14994 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYN3O14994 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SYN3O14994 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYN3O14994 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.57■□□□□ 0.88
SYN3O14994 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN3O14994 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN3O14994 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN3O14994 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN3O14994 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SYN3O14994 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SYN3O14994 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.56■□□□□ 0.88
SYN3O14994 AC010203.1-204ENST00000548782 407 ntBASIC20.56■□□□□ 0.88
SYN3O14994 AC010653.2-201ENST00000623505 997 ntBASIC20.56■□□□□ 0.88
SYN3O14994 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.56■□□□□ 0.88
SYN3O14994 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SYN3O14994 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYN3O14994 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYN3O14994 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SYN3O14994 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SYN3O14994 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.55■□□□□ 0.88
SYN3O14994 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.55■□□□□ 0.88
SYN3O14994 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SYN3O14994 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYN3O14994 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYN3O14994 INGX-201ENST00000359239 846 ntBASIC20.55■□□□□ 0.88
SYN3O14994 HMGA1P5-201ENST00000412453 271 ntBASIC20.55■□□□□ 0.88
SYN3O14994 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
SYN3O14994 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYN3O14994 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYN3O14994 ATP5G1P1-201ENST00000448724 379 ntBASIC20.55■□□□□ 0.88
SYN3O14994 CA15P1-201ENST00000481698 905 ntBASIC20.55■□□□□ 0.88
SYN3O14994 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.55■□□□□ 0.88
SYN3O14994 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.55■□□□□ 0.88
SYN3O14994 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.55■□□□□ 0.88
SYN3O14994 AL049597.2-201ENST00000565575 961 ntBASIC20.55■□□□□ 0.88
SYN3O14994 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.55■□□□□ 0.88
SYN3O14994 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.55■□□□□ 0.88
SYN3O14994 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.55■□□□□ 0.88
SYN3O14994 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.55■□□□□ 0.88
SYN3O14994 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SYN3O14994 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.55■□□□□ 0.88
SYN3O14994 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.55■□□□□ 0.88
SYN3O14994 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYN3O14994 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.55■□□□□ 0.88
SYN3O14994 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYN3O14994 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYN3O14994 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYN3O14994 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYN3O14994 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SYN3O14994 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYN3O14994 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYN3O14994 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYN3O14994 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.54■□□□□ 0.88
SYN3O14994 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYN3O14994 CKBP1-201ENST00000565489 1086 ntBASIC20.54■□□□□ 0.88
SYN3O14994 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms