Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NFKBIEO00221 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.63■■□□□ 1.37
NFKBIEO00221 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.63■■□□□ 1.37
NFKBIEO00221 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.63■■□□□ 1.37
NFKBIEO00221 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.63■■□□□ 1.37
NFKBIEO00221 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NFKBIEO00221 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.63■■□□□ 1.37
NFKBIEO00221 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.63■■□□□ 1.37
NFKBIEO00221 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.63■■□□□ 1.37
NFKBIEO00221 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.62■■□□□ 1.37
NFKBIEO00221 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
NFKBIEO00221 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
NFKBIEO00221 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 AP000593.1-201ENST00000393668 712 ntBASIC23.62■■□□□ 1.37
NFKBIEO00221 AL022342.1-201ENST00000400363 863 ntBASIC23.62■■□□□ 1.37
NFKBIEO00221 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.62■■□□□ 1.37
NFKBIEO00221 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.62■■□□□ 1.37
NFKBIEO00221 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
NFKBIEO00221 AC104692.2-201ENST00000603054 253 ntBASIC23.62■■□□□ 1.37
NFKBIEO00221 IFNL4P1-201ENST00000607083 540 ntBASIC23.62■■□□□ 1.37
NFKBIEO00221 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
NFKBIEO00221 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.62■■□□□ 1.37
NFKBIEO00221 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NFKBIEO00221 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.62■■□□□ 1.37
NFKBIEO00221 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NFKBIEO00221 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NFKBIEO00221 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NFKBIEO00221 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NFKBIEO00221 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.61■■□□□ 1.37
NFKBIEO00221 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NFKBIEO00221 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NFKBIEO00221 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.61■■□□□ 1.37
NFKBIEO00221 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
NFKBIEO00221 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.61■■□□□ 1.37
NFKBIEO00221 AL031008.1-201ENST00000619963 541 ntBASIC23.61■■□□□ 1.37
NFKBIEO00221 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NFKBIEO00221 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.61■■□□□ 1.37
NFKBIEO00221 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.61■■□□□ 1.37
NFKBIEO00221 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NFKBIEO00221 BX119927.1-201ENST00000636596 1552 ntBASIC23.61■■□□□ 1.37
NFKBIEO00221 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NFKBIEO00221 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NFKBIEO00221 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NFKBIEO00221 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NFKBIEO00221 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.6■■□□□ 1.37
NFKBIEO00221 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
NFKBIEO00221 EMBP1-201ENST00000458200 901 ntBASIC23.6■■□□□ 1.37
NFKBIEO00221 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.6■■□□□ 1.37
NFKBIEO00221 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.6■■□□□ 1.37
NFKBIEO00221 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NFKBIEO00221 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.6■■□□□ 1.37
NFKBIEO00221 AC011498.5-201ENST00000592027 486 ntBASIC23.6■■□□□ 1.37
NFKBIEO00221 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.6■■□□□ 1.37
NFKBIEO00221 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NFKBIEO00221 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
NFKBIEO00221 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NFKBIEO00221 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
NFKBIEO00221 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NFKBIEO00221 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.59■■□□□ 1.37
NFKBIEO00221 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.59■■□□□ 1.37
NFKBIEO00221 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
NFKBIEO00221 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.59■■□□□ 1.37
NFKBIEO00221 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.59■■□□□ 1.37
NFKBIEO00221 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.59■■□□□ 1.37
NFKBIEO00221 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.59■■□□□ 1.37
NFKBIEO00221 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NFKBIEO00221 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NFKBIEO00221 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NFKBIEO00221 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
NFKBIEO00221 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NFKBIEO00221 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.59■■□□□ 1.37
NFKBIEO00221 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NFKBIEO00221 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
NFKBIEO00221 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.58■■□□□ 1.37
NFKBIEO00221 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.58■■□□□ 1.37
NFKBIEO00221 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.58■■□□□ 1.37
NFKBIEO00221 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.58■■□□□ 1.37
NFKBIEO00221 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NFKBIEO00221 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.58■■□□□ 1.37
NFKBIEO00221 RASA4DP-201ENST00000460726 1199 ntBASIC23.58■■□□□ 1.37
NFKBIEO00221 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.58■■□□□ 1.37
NFKBIEO00221 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.58■■□□□ 1.37
NFKBIEO00221 AL121672.3-201ENST00000608644 468 ntBASIC23.58■■□□□ 1.37
NFKBIEO00221 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.58■■□□□ 1.37
NFKBIEO00221 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.58■■□□□ 1.37
NFKBIEO00221 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NFKBIEO00221 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.58■■□□□ 1.36
NFKBIEO00221 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NFKBIEO00221 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms