Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 FAM210CP-201ENST00000445714 574 ntBASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 AL353708.3-201ENST00000610272 989 ntBASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPA2E9PIF3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 MMP23A-201ENST00000234610 1017 ntBASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 NUDT16P1-203ENST00000513809 620 ntBASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 AC116351.2-201ENST00000606540 1585 ntBASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA2E9PIF3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 KSR1P1-201ENST00000446298 240 ntBASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 AC018553.1-201ENST00000616682 1458 ntBASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 PCDHAC2-203ENST00000615316 3011 ntBASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 AC073130.3-201ENST00000624389 2278 ntBASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA2E9PIF3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 TCF3P1-201ENST00000423021 1937 ntBASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 NIFKP9-201ENST00000419265 221 ntBASIC17.72■□□□□ 0.43
NPIPA2E9PIF3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms