Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 KRT18P22-201ENST00000402024 1347 ntBASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC005363.2-201ENST00000618631 242 ntBASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC010947.1-201ENST00000623454 693 ntBASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CYP2D8P-201ENST00000433633 1490 ntBASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 Z85996.1-201ENST00000494644 937 ntBASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TCF3P1-201ENST00000423021 1937 ntBASIC19.49■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC091390.4-202ENST00000476426 537 ntBASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms