Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 KRT17P3-201ENST00000420566 1262 ntBASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 CD99P1-205ENST00000527459 561 ntBASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC162PA2VCL2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 KRT18P16-201ENST00000510337 1294 ntBASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 MIR4651-201ENST00000582622 73 ntBASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 MTDHP1-201ENST00000605323 784 ntBASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC162PA2VCL2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC162PA2VCL2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 KRT8P8-201ENST00000434750 1448 ntBASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 AL020996.1-203ENST00000536896 2307 ntBASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 PRKY-204ENST00000533551 1019 ntBASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms