Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 MTND3P13-201ENST00000574391 343 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 H3F3BP2-201ENST00000583907 357 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC091488.1-201ENST00000604239 660 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC087683.2-201ENST00000611384 326 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AL512624.1-201ENST00000613638 469 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 MIR6826-201ENST00000617808 98 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AP000676.4-201ENST00000624659 623 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL4A3BPQ9Y5P4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.21□□□□□ -1.41
COL4A3BPQ9Y5P4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL4A3BPQ9Y5P4 AC083837.1-201ENST00000565297 2994 ntBASIC6.21□□□□□ -1.41
COL4A3BPQ9Y5P4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.21□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC01963-201ENST00000562038 3148 ntBASIC6.21□□□□□ -1.41
COL4A3BPQ9Y5P4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL4A3BPQ9Y5P4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 CR788268.1-201ENST00000603931 1809 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 RNU6-413P-201ENST00000384115 107 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 SFR1P1-201ENST00000403720 688 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AL009179.1-201ENST00000406085 265 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 HMGB1P49-201ENST00000418882 569 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 OR2X1P-201ENST00000421144 687 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 TPTE2P3-201ENST00000441562 1189 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AL591719.1-201ENST00000444669 744 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 EIF4A1P11-201ENST00000451239 222 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 RPL35AP19-201ENST00000469425 329 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC104689.1-201ENST00000473356 768 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 RPS27P23-201ENST00000487608 251 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL184P-201ENST00000488308 297 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC108693.1-201ENST00000496068 432 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 IGKV2-18-201ENST00000522607 343 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AP001317.1-201ENST00000531194 960 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC122688.1-201ENST00000541494 223 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 MTND4P33-201ENST00000556706 766 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 MIR4489-201ENST00000578869 62 ntBASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A3BPQ9Y5P4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 CASC19-248ENST00000641674 1356 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 RNA5SP514-201ENST00000363717 111 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 RNU6-619P-201ENST00000365146 108 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 GSTA8P-201ENST00000404253 637 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms