Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC104964.3-201ENST00000606115 2860 ntBASIC4.93□□□□□ -1.62
PCDHGA1Q9Y5H4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHGA1Q9Y5H4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHGA1Q9Y5H4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHGA1Q9Y5H4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDHGA1Q9Y5H4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 MIR298-201ENST00000401212 88 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 RN7SKP100-201ENST00000411258 284 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC048351.1-201ENST00000420064 602 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC009480.2-201ENST00000422916 432 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 DPY19L1P2-201ENST00000426647 915 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AL136231.1-201ENST00000429407 730 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC124944.2-201ENST00000429866 1242 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 ELOCP10-201ENST00000440624 327 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 RPS15AP29-201ENST00000445539 400 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 CYCSP42-201ENST00000450823 238 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 UBA52P3-201ENST00000491303 382 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC010627.1-201ENST00000503819 1294 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC026688.1-201ENST00000520639 1168 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC068790.7-201ENST00000602347 528 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 ELOCP34-201ENST00000604436 327 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AL139124.1-201ENST00000609123 421 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC007786.3-201ENST00000615154 596 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC009704.2-201ENST00000618739 483 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC091932.2-201ENST00000623014 291 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 HPVC1-201ENST00000629899 1198 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 AL118496.1-201ENST00000440201 1812 ntBASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA1Q9Y5H4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AC006206.1-201ENST00000544842 3387 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 GLULP6-201ENST00000399502 913 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 PPIAP9-201ENST00000403866 498 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 GSTM3P2-201ENST00000412746 530 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 MTCO3P43-201ENST00000440974 771 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 RPL34P26-201ENST00000445636 354 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AC234781.3-201ENST00000452540 973 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AP000942.1-201ENST00000463969 747 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 RNA5SP230-201ENST00000517039 122 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 HIGD1AP18-201ENST00000520730 278 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 OR4A17P-201ENST00000526032 904 ntBASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA1Q9Y5H4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms