Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RPSAP51-201ENST00000497462 645 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC092349.1-201ENST00000504903 310 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC008562.1-201ENST00000521763 330 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AL389895.1-201ENST00000554127 252 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 NDUFA3P4-201ENST00000560814 250 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 EEF1B2P1-201ENST00000567221 672 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RN7SL66P-201ENST00000582099 264 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 MIR3668-201ENST00000582138 75 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC010525.2-201ENST00000590920 195 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC009955.2-201ENST00000597288 542 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC090617.10-201ENST00000624308 134 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC010149.2-201ENST00000637608 315 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 OR7E161P-202ENST00000641994 1033 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHB11Q9Y5F2 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHB11Q9Y5F2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.96□□□□□ -1.29
PCDHB11Q9Y5F2 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHB11Q9Y5F2 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHB11Q9Y5F2 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHB11Q9Y5F2 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 RNU5E-1-201ENST00000362477 120 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 Y_RNA.202-201ENST00000364083 110 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SNORD42.2-201ENST00000365570 69 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SNORA32.2-201ENST00000384049 122 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-474P-201ENST00000384243 107 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL672212.1-201ENST00000422246 400 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 ATP5JP1-201ENST00000431631 322 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 CYCSP44-201ENST00000448560 313 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 Y_RNA.639-201ENST00000458981 102 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 MRPS17P3-201ENST00000465453 385 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 RN7SL518P-201ENST00000491887 280 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 RPL19P11-201ENST00000495944 589 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 RN7SL775P-201ENST00000498361 336 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 GAPDHP56-201ENST00000506031 988 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 BTF3P12-201ENST00000519620 469 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 PMS2P3-207ENST00000529061 717 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SCOCP1-201ENST00000554676 349 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 MIR4470-201ENST00000583453 72 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SNRPGP17-201ENST00000603780 214 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 BX664608.1-201ENST00000610519 487 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL136097.3-201ENST00000611097 505 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AC104237.2-201ENST00000612456 443 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AC093913.1-201ENST00000614178 329 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AC245407.2-201ENST00000614199 451 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL592429.1-201ENST00000403909 1473 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 AL359922.3-201ENST00000624779 1670 ntBASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms