Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 SNORA71.2-201ENST00000364941 134 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 RNU1-63P-201ENST00000383902 164 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 MIR550A3-201ENST00000390735 95 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 RNA5SP372-201ENST00000390836 115 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 RNA5SP397-201ENST00000391323 118 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 OR1F12-201ENST00000402365 945 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 RN7SKP199-201ENST00000410325 305 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AL359265.2-201ENST00000434367 631 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC090013.1-201ENST00000485147 480 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 UBA52P3-201ENST00000491303 382 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC021146.3-201ENST00000511911 260 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 PDCD5P1-201ENST00000543528 309 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 NPM1P45-201ENST00000583151 559 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC068790.7-201ENST00000602347 528 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AL133338.2-201ENST00000604292 736 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC091905.2-201ENST00000623143 306 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AP001273.1-201ENST00000624493 3152 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 VN2R3P-201ENST00000422626 1412 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC105074.1-201ENST00000623380 3095 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 MTCO1P22-201ENST00000604619 1360 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 VPS35P1-201ENST00000563400 1518 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC120338.1-201ENST00000625074 1541 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 MAPK10-263ENST00000641052 4307 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC139769.1-204ENST00000472297 1931 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 IL6STP1-201ENST00000346911 1020 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC019155.1-201ENST00000382242 574 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 RNU6-167P-201ENST00000384292 106 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 MIR659-201ENST00000384963 97 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AL049697.2-201ENST00000403708 294 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC009237.10-201ENST00000414112 510 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC062016.2-201ENST00000420950 676 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC007394.1-201ENST00000421941 531 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 CDY14P-201ENST00000431260 1014 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AL138787.1-202ENST00000437804 898 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 CDY12P-201ENST00000440679 1015 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 CDY13P-201ENST00000445813 1015 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 CDY23P-201ENST00000451661 1014 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AL133244.1-201ENST00000456007 258 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC005008.1-201ENST00000456151 612 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 RPL12P20-201ENST00000475538 479 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC017007.3-201ENST00000479865 435 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC103792.1-201ENST00000603591 919 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC091953.3-201ENST00000623220 236 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC093535.2-201ENST00000624769 2326 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 AC005332.5-201ENST00000591222 2919 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms