Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 SIAH1P1-201ENST00000479411 923 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AC098869.1-201ENST00000481627 292 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 RPL7AP30-201ENST00000482859 796 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AC092349.1-201ENST00000504903 310 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AC011494.1-201ENST00000596454 237 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AC245028.3-201ENST00000618197 285 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AL139805.2-201ENST00000455305 2433 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 MALAT1-202ENST00000534336 8708 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC11.9□□□□□ -0.51
SCAF1Q9H7N4 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.51
SCAF1Q9H7N4 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC11.9□□□□□ -0.51
SCAF1Q9H7N4 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC11.9□□□□□ -0.51
SCAF1Q9H7N4 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 Y_RNA.48-201ENST00000362710 103 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 Y_RNA.84-201ENST00000363011 104 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AL136097.1-201ENST00000456945 913 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AC109925.1-201ENST00000478069 331 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 UBE2CP1-201ENST00000557130 554 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 MIR6889-201ENST00000613185 59 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AC123768.4-201ENST00000616244 701 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 OR7E122P-202ENST00000641144 6171 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 XIST-211ENST00000635841 1734 ntTSL 5 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AC079178.2-201ENST00000439323 1624 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 CASC15-203ENST00000605917 4461 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 AC025040.2-201ENST00000558657 1852 ntBASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC11.89□□□□□ -0.51
SCAF1Q9H7N4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 RNA5SP218-201ENST00000363188 109 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 Y_RNA.353-201ENST00000365440 108 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 RNU6-441P-201ENST00000384545 106 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC096664.1-201ENST00000393996 778 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 RNA5SP265-201ENST00000411023 111 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 RN7SKP126-201ENST00000411143 300 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 HMGN1P34-201ENST00000413023 290 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 Z99755.1-201ENST00000414048 380 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 TRAPPC2P10-201ENST00000415662 323 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 TRAPPC2P5-201ENST00000426293 308 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 RPL12P15-201ENST00000433385 499 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC002381.1-201ENST00000447049 280 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 RN7SL791P-201ENST00000467868 295 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC104472.2-201ENST00000469035 601 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 RN7SL392P-201ENST00000473024 299 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 PPP1R1AP1-201ENST00000525622 425 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 PPIAP6-201ENST00000557078 499 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC004584.2-201ENST00000570407 410 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 MIR3714-201ENST00000579507 65 ntBASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCAF1Q9H7N4 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms