Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CYCSP43-201ENST00000438233 310 ntBASIC7.32□□□□□ -1.24
IFT140Q96RY7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 SNORA59A-201ENST00000459326 152 ntBASIC7.32□□□□□ -1.24
IFT140Q96RY7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 AC010487.1-201ENST00000594408 1172 ntBASIC7.32□□□□□ -1.24
IFT140Q96RY7 AC025175.1-201ENST00000606482 759 ntBASIC7.32□□□□□ -1.24
IFT140Q96RY7 AC021422.1-201ENST00000621212 473 ntBASIC7.32□□□□□ -1.24
IFT140Q96RY7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
IFT140Q96RY7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
IFT140Q96RY7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 AC115285.1-201ENST00000424879 736 ntBASIC7.31□□□□□ -1.24
IFT140Q96RY7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 RNA5SP246-201ENST00000458909 119 ntBASIC7.31□□□□□ -1.24
IFT140Q96RY7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 SUMO2P19-201ENST00000518920 295 ntBASIC7.31□□□□□ -1.24
IFT140Q96RY7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 SRGNP1-201ENST00000603392 451 ntBASIC7.31□□□□□ -1.24
IFT140Q96RY7 MIR7151-201ENST00000617477 60 ntBASIC7.31□□□□□ -1.24
IFT140Q96RY7 AC005858.4-201ENST00000623191 700 ntBASIC7.31□□□□□ -1.24
IFT140Q96RY7 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
IFT140Q96RY7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
IFT140Q96RY7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
IFT140Q96RY7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
IFT140Q96RY7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
IFT140Q96RY7 EIF3EP2-201ENST00000423042 1814 ntBASIC7.31□□□□□ -1.24
IFT140Q96RY7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
IFT140Q96RY7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
IFT140Q96RY7 MIR491-201ENST00000384877 84 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 PCNPP4-201ENST00000414817 517 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 RPL6P29-201ENST00000414863 865 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC013429.2-201ENST00000418798 781 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 KRR1P1-201ENST00000419430 803 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 RPS27AP17-201ENST00000463344 455 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC010374.1-201ENST00000503762 1237 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC107982.3-201ENST00000584957 985 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 OR8G7P-201ENST00000616658 848 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC018816.2-201ENST00000621460 353 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC108032.1-201ENST00000416706 207 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
IFT140Q96RY7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC012671.1-201ENST00000451912 203 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC105031.1-201ENST00000518550 476 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC015912.2-201ENST00000571053 181 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.3□□□□□ -1.24
IFT140Q96RY7 AC009093.8-201ENST00000641769 292 ntBASIC7.3□□□□□ -1.24
IFT140Q96RY7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
IFT140Q96RY7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 AL136164.3-201ENST00000624429 3978 ntBASIC7.29□□□□□ -1.24
IFT140Q96RY7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
IFT140Q96RY7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
IFT140Q96RY7 AC008549.2-201ENST00000333482 706 ntBASIC7.29□□□□□ -1.24
IFT140Q96RY7 RPL21P67-201ENST00000402896 478 ntBASIC7.29□□□□□ -1.24
IFT140Q96RY7 CYCSP10-201ENST00000417973 294 ntBASIC7.29□□□□□ -1.24
IFT140Q96RY7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.29□□□□□ -1.24
IFT140Q96RY7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
IFT140Q96RY7 AL357559.1-201ENST00000622228 274 ntBASIC7.29□□□□□ -1.24
IFT140Q96RY7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
IFT140Q96RY7 DDX18P5-201ENST00000534547 1306 ntBASIC7.29□□□□□ -1.24
IFT140Q96RY7 AC022417.1-201ENST00000624768 1303 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms