Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MFSD8-245ENST00000641743 948 ntBASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 AC024587.1-201ENST00000505925 2157 ntBASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNGAP1Q96PV0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 OR10J6P-201ENST00000289731 930 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 RNU6-114P-201ENST00000384704 105 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 CYCSP46-201ENST00000423569 204 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 HDAC1P2-201ENST00000453661 1398 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC104849.1-201ENST00000462623 405 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC093267.1-201ENST00000489176 961 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 CCDC11P1-201ENST00000503137 1162 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 ABCA11P-202ENST00000504019 2110 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 OR51K1P-201ENST00000510214 950 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC109445.1-201ENST00000512356 383 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 RNA5SP116-201ENST00000516132 98 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC118273.2-201ENST00000532092 465 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AP005901.5-201ENST00000545779 1796 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC104785.1-201ENST00000603220 588 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 IMMP1LP1-201ENST00000605170 488 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 RNU4-89P-201ENST00000607443 133 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC004067.1-201ENST00000608733 700 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AP000238.1-201ENST00000608759 426 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC090517.2-201ENST00000614966 680 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 MIR7155-201ENST00000615925 56 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AL121873.1-201ENST00000616013 524 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AL136981.2-201ENST00000617319 734 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC138932.5-201ENST00000617759 563 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC007742.2-201ENST00000618226 398 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC092794.2-201ENST00000620933 563 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC009120.7-201ENST00000623452 780 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC135068.5-201ENST00000624197 983 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC011369.2-201ENST00000624423 1567 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 AC087821.2-201ENST00000637086 450 ntBASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNGAP1Q96PV0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 NCOA4P2-201ENST00000340589 1813 ntBASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNGAP1Q96PV0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms