Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC007998.4-201ENST00000612496 2533 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM47Q96LD4 AC110597.1-201ENST00000562669 3176 ntBASIC7.71□□□□□ -1.17
TRIM47Q96LD4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM47Q96LD4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.71□□□□□ -1.17
TRIM47Q96LD4 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.71□□□□□ -1.17
TRIM47Q96LD4 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM47Q96LD4 MROH3P-201ENST00000435735 2676 ntBASIC7.71□□□□□ -1.17
TRIM47Q96LD4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.71□□□□□ -1.17
TRIM47Q96LD4 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM47Q96LD4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC007938.1-201ENST00000562524 2902 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 RNU6-209P-201ENST00000384118 107 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 RNU6-1222P-201ENST00000384615 107 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC004386.1-201ENST00000393214 761 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 RN7SKP271-201ENST00000410528 320 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 RPL17P12-201ENST00000413391 526 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 RNGTTP1-201ENST00000420965 728 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 LDHAP2-201ENST00000437325 985 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 CALM1P1-201ENST00000442082 433 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 MRPL50P4-201ENST00000446432 475 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC096741.1-201ENST00000472250 846 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC026254.2-201ENST00000475295 371 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 RPL7AP23-201ENST00000482625 776 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 RN7SL101P-201ENST00000496350 279 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC008429.2-201ENST00000523057 864 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC239860.2-201ENST00000525886 270 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 PCMTD1P2-201ENST00000565017 355 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 MIR3614-201ENST00000581261 86 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC020765.1-201ENST00000604296 328 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 OR51C1P-201ENST00000608504 942 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AF001550.2-201ENST00000636643 217 ntBASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM47Q96LD4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 MIR369-201ENST00000362155 70 ntBASIC7.7□□□□□ -1.18
TRIM47Q96LD4 SNORD42.2-201ENST00000365570 69 ntBASIC7.7□□□□□ -1.18
TRIM47Q96LD4 Y_RNA.474-201ENST00000384341 102 ntBASIC7.7□□□□□ -1.18
TRIM47Q96LD4 AL512422.1-201ENST00000407033 553 ntBASIC7.7□□□□□ -1.18
TRIM47Q96LD4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.7□□□□□ -1.18
TRIM47Q96LD4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms