Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
TOPBP1Q92547 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TOPBP1Q92547 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
TOPBP1Q92547 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.3□□□□□ -1.24
TOPBP1Q92547 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.3□□□□□ -1.24
TOPBP1Q92547 AC026403.1-201ENST00000518938 295 ntBASIC7.3□□□□□ -1.24
TOPBP1Q92547 HSPE1P5-201ENST00000561489 272 ntBASIC7.3□□□□□ -1.24
TOPBP1Q92547 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.3□□□□□ -1.24
TOPBP1Q92547 AC130352.1-201ENST00000602979 661 ntBASIC7.3□□□□□ -1.24
TOPBP1Q92547 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC7.3□□□□□ -1.24
TOPBP1Q92547 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TOPBP1Q92547 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TOPBP1Q92547 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.3□□□□□ -1.24
TOPBP1Q92547 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 AL603750.1-201ENST00000624216 1717 ntBASIC7.29□□□□□ -1.24
TOPBP1Q92547 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 RN7SKP182-201ENST00000410772 298 ntBASIC7.29□□□□□ -1.24
TOPBP1Q92547 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 RN7SL812P-201ENST00000493791 279 ntBASIC7.29□□□□□ -1.24
TOPBP1Q92547 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOPBP1Q92547 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
TOPBP1Q92547 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TOPBP1Q92547 PPIAP13-201ENST00000434706 478 ntBASIC7.28□□□□□ -1.24
TOPBP1Q92547 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 AC107982.3-201ENST00000584957 985 ntBASIC7.28□□□□□ -1.24
TOPBP1Q92547 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
TOPBP1Q92547 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
TOPBP1Q92547 RNA5SP151-201ENST00000365632 117 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TOPBP1Q92547 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC108032.1-201ENST00000416706 207 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC004938.1-201ENST00000438468 308 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 KCTD9P2-201ENST00000512203 1013 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC012314.7-201ENST00000619693 93 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 FP325313.1-201ENST00000638228 703 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC233968.1-201ENST00000611212 1300 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC093829.1-201ENST00000506662 1618 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TOPBP1Q92547 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 RNU1-63P-201ENST00000383902 164 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TOPBP1Q92547 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TOPBP1Q92547 RPEP2-201ENST00000432149 701 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 snoU13.24-201ENST00000458998 104 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 RNA5SP360-201ENST00000516555 118 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 MIR6500-201ENST00000622700 86 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC020978.9-201ENST00000624380 1141 ntBASIC7.27□□□□□ -1.25
TOPBP1Q92547 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.27□□□□□ -1.25
TOPBP1Q92547 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TOPBP1Q92547 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 CASC19-206ENST00000641028 1430 ntBASIC7.26□□□□□ -1.25
TOPBP1Q92547 AL355852.1-201ENST00000454081 1771 ntBASIC7.26□□□□□ -1.25
TOPBP1Q92547 EIF3EP2-201ENST00000423042 1814 ntBASIC7.26□□□□□ -1.25
TOPBP1Q92547 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TOPBP1Q92547 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TOPBP1Q92547 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 FCF1P5-201ENST00000406490 482 ntBASIC7.26□□□□□ -1.25
TOPBP1Q92547 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 AC114814.2-201ENST00000419195 485 ntBASIC7.26□□□□□ -1.25
TOPBP1Q92547 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TOPBP1Q92547 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 AC007688.1-201ENST00000475592 759 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms