Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 YWHAZP7-201ENST00000436906 631 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 LINC02210-201ENST00000444561 288 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 MTCYBP3-201ENST00000445588 1137 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 CASP3P1-201ENST00000446037 609 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 BUD31P2-201ENST00000449374 300 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 RPS27AP2-201ENST00000457576 465 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC105918.1-201ENST00000474399 838 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 RPL7P40-201ENST00000481703 745 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 HPRT1P2-201ENST00000505250 544 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 LTV1P1-201ENST00000510683 1237 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 OR5D2P-201ENST00000524390 911 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC092851.1-201ENST00000535964 478 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 ELOCP32-201ENST00000548625 324 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AP005403.1-201ENST00000579720 229 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC012616.1-201ENST00000600294 197 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC125494.3-201ENST00000602759 455 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AP000403.1-201ENST00000603349 851 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AP002906.1-201ENST00000603405 233 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC005377.1-201ENST00000605126 456 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AL139286.2-201ENST00000606838 396 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AL135786.2-201ENST00000608422 615 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC009237.15-201ENST00000610252 501 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 SNORA17.5-201ENST00000630429 132 ntBASIC5.42□□□□□ -1.54
VRK3Q8IV63 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VRK3Q8IV63 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.42□□□□□ -1.54
VRK3Q8IV63 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AL355488.2-201ENST00000609909 2850 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 RNU6-1283P-201ENST00000365314 105 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 RNU6-157P-201ENST00000383957 107 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 HMGB1P10-201ENST00000395823 563 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 RPL7P56-201ENST00000429441 717 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC012075.1-201ENST00000436549 580 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 CYCSP42-201ENST00000450823 238 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 LINC00888-204ENST00000487386 421 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 NRBF2P4-201ENST00000520874 850 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 IGKV3D-34-201ENST00000522638 302 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 OR8Q1P-201ENST00000526467 655 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 DEFB130C-202ENST00000530001 230 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 CCNG2P1-201ENST00000549521 1000 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 NPM1P5-201ENST00000557228 838 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 HMGN2P47-201ENST00000559378 272 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 SNORD95-201ENST00000579879 68 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC104695.2-201ENST00000605056 775 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 AC025588.4-201ENST00000615802 908 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms