Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RMST_5.1-201ENST00000618704 126 ntBASIC3.24□□□□□ -1.89
SCXQ7RTU7 AP000648.2-201ENST00000624182 404 ntBASIC3.24□□□□□ -1.89
SCXQ7RTU7 AL672167.1-203ENST00000641299 2975 ntBASIC3.24□□□□□ -1.89
SCXQ7RTU7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.24□□□□□ -1.89
SCXQ7RTU7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SCXQ7RTU7 AC009229.4-201ENST00000623854 1947 ntBASIC3.24□□□□□ -1.89
SCXQ7RTU7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCXQ7RTU7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SCXQ7RTU7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SCXQ7RTU7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SCXQ7RTU7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.24□□□□□ -1.89
SCXQ7RTU7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SCXQ7RTU7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.24□□□□□ -1.89
SCXQ7RTU7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCXQ7RTU7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 MAPK10-263ENST00000641052 4307 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 RN7SKP113-201ENST00000363891 295 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 RNU6-1279P-201ENST00000383917 103 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 SNORA56-201ENST00000383966 129 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 MIR92A2-201ENST00000385299 75 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 SNORA48.4-201ENST00000391089 134 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 RN7SKP16-201ENST00000410180 299 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 RN7SKP199-201ENST00000410325 305 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 RN7SKP222-201ENST00000410651 315 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 RPL26P29-201ENST00000415623 438 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AL590806.1-201ENST00000415818 853 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC048351.1-201ENST00000420064 602 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 MTCO3P21-201ENST00000430791 643 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC008072.1-201ENST00000434254 824 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 RNU6-1218P-201ENST00000458990 108 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 GYG1P1-201ENST00000460864 698 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 PPIAP21-201ENST00000464473 501 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 RPS12P31-201ENST00000491419 398 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC010350.1-201ENST00000504908 231 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC097173.1-201ENST00000505862 819 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 BTF3P13-201ENST00000513224 490 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 RN7SKP46-201ENST00000515942 234 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 RNA5SP464-201ENST00000516251 108 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 RNA5SP43-201ENST00000516559 110 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC008033.2-201ENST00000542626 177 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC137768.1-201ENST00000549998 553 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 NMNAT1P1-201ENST00000554095 876 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 HNRNPCP4-201ENST00000571636 900 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AP005901.4-201ENST00000577336 569 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC105254.2-201ENST00000603636 436 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 BNIP3P35-201ENST00000604530 490 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AL353600.1-201ENST00000608148 251 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC145207.9-201ENST00000623802 325 ntBASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCXQ7RTU7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SCXQ7RTU7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 Z73965.1-201ENST00000623412 2297 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL445487.1-201ENST00000415694 1580 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 RNA5SP87-201ENST00000384155 118 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC136624.1-201ENST00000400791 413 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 HSPD1P16-201ENST00000402302 394 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL021331.1-201ENST00000402817 582 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms