Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 BMS1P13-201ENST00000417301 885 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC092162.1-201ENST00000432828 434 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RHOT1P3-201ENST00000436571 331 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 MRPL48P1-201ENST00000445390 636 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 EIF4A1P11-201ENST00000451239 222 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 snoU13.20-201ENST00000459180 104 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 CCDC75P1-201ENST00000469247 791 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RPS27AP16-201ENST00000492222 470 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC010627.1-201ENST00000503819 1294 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RNA5SP43-201ENST00000516559 110 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RNU6-347P-201ENST00000516658 105 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 SETP1-201ENST00000556014 845 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AC087763.1-201ENST00000603391 286 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AL133268.1-201ENST00000405676 1401 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AL359922.3-201ENST00000624779 1670 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 RNU4-44P-201ENST00000363050 141 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 RNA5SP428-201ENST00000365129 132 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 NPM1P10-201ENST00000398310 865 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 U3.35-201ENST00000408405 208 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 RANP4-201ENST00000413361 655 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 TRGV6-201ENST00000417928 299 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 RGS17P1-201ENST00000423358 553 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 RPL7AP6-201ENST00000477943 801 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 RN7SL319P-201ENST00000480656 221 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 SUMO1P1-201ENST00000497904 306 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC008638.1-201ENST00000506035 866 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC026688.1-201ENST00000520639 1168 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 MTCO3P22-201ENST00000603219 784 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 PSMA6P4-201ENST00000603247 718 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC013244.1-201ENST00000604279 193 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC087783.2-201ENST00000605070 562 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC010200.2-201ENST00000605098 235 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC005377.1-201ENST00000605126 456 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 KATNBL1P1-201ENST00000605192 748 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC097505.1-201ENST00000610199 565 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AC011472.4-201ENST00000615848 491 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 AL049794.2-201ENST00000616301 365 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.43□□□□□ -1.7
NIPAL3Q6P499 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NIPAL3Q6P499 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 SNORA70-201ENST00000384436 135 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 MIR105-2-201ENST00000385083 81 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AL021331.1-201ENST00000402817 582 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms