Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 SNORA5A-201ENST00000384111 134 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AC004836.1-201ENST00000623032 634 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 RN7SKP16-201ENST00000410180 299 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 ABCF2P2-201ENST00000450549 296 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 IGBP1P4-201ENST00000503202 879 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC079064.1-201ENST00000528365 362 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 TRAV8-5-201ENST00000537369 341 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 MIR4513-201ENST00000581077 86 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 MIMT1-201ENST00000597105 1050 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 OR7A19P-201ENST00000608051 733 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC138907.8-201ENST00000623981 2256 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 RPL6P29-201ENST00000414863 865 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 OR6C71P-201ENST00000432580 913 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 RPS29P7-201ENST00000439662 171 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 RPL6P9-201ENST00000466502 859 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC104763.1-201ENST00000475274 360 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC022336.1-201ENST00000475510 337 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC090136.1-201ENST00000520009 240 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 AL391684.1-202ENST00000641293 1636 ntBASIC4.38□□□□□ -1.71
RIF1Q5UIP0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIF1Q5UIP0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 RNA5SP124-201ENST00000362739 110 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 AC007688.1-201ENST00000475592 759 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 RPL35P6-201ENST00000490024 372 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 CAB39P1-201ENST00000502277 460 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 VN2R3P-201ENST00000422626 1412 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 ATP5F1P4-201ENST00000397288 746 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 RAB9AP3-201ENST00000412737 573 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 AC073052.1-201ENST00000440417 714 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 RAB9AP1-201ENST00000449393 573 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 PPIAP3-201ENST00000450588 505 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 PPIAP15-201ENST00000479662 484 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.37□□□□□ -1.71
RIF1Q5UIP0 MIR3651-201ENST00000630427 90 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 AC009093.8-201ENST00000641769 292 ntBASIC4.37□□□□□ -1.71
RIF1Q5UIP0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms