Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AC073072.2-201ENST00000447425 348 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP39Q53GS9 OTX2P1-201ENST00000450956 354 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC234781.3-201ENST00000452540 973 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.79□□□□□ -1.48
USP39Q53GS9 RN7SL172P-201ENST00000460535 303 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 RN7SL329P-201ENST00000467740 299 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.79□□□□□ -1.48
USP39Q53GS9 RN7SL727P-201ENST00000482164 296 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.79□□□□□ -1.48
USP39Q53GS9 AC093270.2-201ENST00000486157 792 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 RPL32P33-201ENST00000487023 394 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 TRBV5-2-201ENST00000489095 273 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 HMGB1P3-201ENST00000502802 616 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.79□□□□□ -1.48
USP39Q53GS9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.79□□□□□ -1.48
USP39Q53GS9 RNU6-232P-201ENST00000517144 64 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.79□□□□□ -1.48
USP39Q53GS9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.79□□□□□ -1.48
USP39Q53GS9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.79□□□□□ -1.48
USP39Q53GS9 OR5AM1P-201ENST00000532136 1032 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.79□□□□□ -1.48
USP39Q53GS9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.79□□□□□ -1.48
USP39Q53GS9 ACTR3BP3-201ENST00000565577 979 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 RBM22P1-201ENST00000578589 1214 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.79□□□□□ -1.48
USP39Q53GS9 MIR4420-201ENST00000583944 77 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC005224.3-201ENST00000584683 2140 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.79□□□□□ -1.48
USP39Q53GS9 VN1R81P-201ENST00000602085 372 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 SUGT1P3-202ENST00000604259 383 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AL451049.1-201ENST00000608672 497 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.79□□□□□ -1.48
USP39Q53GS9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AL590240.3-201ENST00000621416 943 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.79□□□□□ -1.48
USP39Q53GS9 AC244258.1-201ENST00000637553 1071 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.79□□□□□ -1.48
USP39Q53GS9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.79□□□□□ -1.48
USP39Q53GS9 AL359955.1-201ENST00000455242 3275 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.79□□□□□ -1.48
USP39Q53GS9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP39Q53GS9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP39Q53GS9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP39Q53GS9 AL161756.3-201ENST00000641216 2071 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.79□□□□□ -1.48
USP39Q53GS9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.79□□□□□ -1.48
USP39Q53GS9 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP39Q53GS9 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP39Q53GS9 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.79□□□□□ -1.48
USP39Q53GS9 AC111188.2-201ENST00000529697 1387 ntBASIC5.79□□□□□ -1.48
USP39Q53GS9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP39Q53GS9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP39Q53GS9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.78□□□□□ -1.48
USP39Q53GS9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP39Q53GS9 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP39Q53GS9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP39Q53GS9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USP39Q53GS9 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP39Q53GS9 ANKRD36P1-201ENST00000344424 659 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
USP39Q53GS9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP39Q53GS9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.78□□□□□ -1.48
USP39Q53GS9 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.78□□□□□ -1.48
USP39Q53GS9 TAF9BP2-201ENST00000400856 499 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 RSL24D1P4-201ENST00000400938 484 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AL589994.1-201ENST00000404962 340 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 SLC35E1P1-201ENST00000419313 864 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.78□□□□□ -1.48
USP39Q53GS9 RPL12P43-201ENST00000420608 499 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AL133173.1-201ENST00000423458 397 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AL590399.2-201ENST00000427536 309 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.78□□□□□ -1.48
USP39Q53GS9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.78□□□□□ -1.48
USP39Q53GS9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.78□□□□□ -1.48
USP39Q53GS9 FGF7P5-201ENST00000441829 291 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 REG1CP-206ENST00000447469 496 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 Z95152.1-201ENST00000453556 656 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AL645937.3-201ENST00000453647 936 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 RNU1-88P-201ENST00000459274 128 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 BZW1P2-201ENST00000473537 826 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.78□□□□□ -1.48
USP39Q53GS9 NDUFA5P12-201ENST00000503796 343 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP39Q53GS9 AC024558.1-201ENST00000505008 528 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.78□□□□□ -1.48
USP39Q53GS9 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.78□□□□□ -1.48
USP39Q53GS9 AC133963.2-201ENST00000513686 578 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 CUL4AP1-201ENST00000514750 1863 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 RNU6-1178P-201ENST00000516674 107 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.78□□□□□ -1.48
USP39Q53GS9 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.78□□□□□ -1.48
USP39Q53GS9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.78□□□□□ -1.48
USP39Q53GS9 PDCL2P2-201ENST00000533651 189 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 CCNG2P1-201ENST00000549521 1000 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AL049779.2-201ENST00000553847 315 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.78□□□□□ -1.48
USP39Q53GS9 AC106734.1-201ENST00000568646 663 ntBASIC5.78□□□□□ -1.48
USP39Q53GS9 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.78□□□□□ -1.48
USP39Q53GS9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms