Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC019072.1-201ENST00000604535 1551 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC097063.1-201ENST00000426714 1797 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CCDC144BQ3MJ40 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 YES1P1-201ENST00000418510 1628 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 ECM1P2-201ENST00000503354 1577 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 U3.7-201ENST00000363668 216 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 SNORA58B-201ENST00000364259 136 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 RNU6-619P-201ENST00000365146 108 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 RNU6-171P-201ENST00000384354 107 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 SFR1P1-201ENST00000403720 688 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 DPPA2P3-201ENST00000411853 655 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 MYL6P5-201ENST00000412707 459 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 USP9YP31-201ENST00000431405 881 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AL390119.1-201ENST00000440329 312 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 TXNP5-201ENST00000441043 315 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC234781.3-201ENST00000452540 973 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 SBDSP1-204ENST00000453858 737 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 ANKRD26P4-201ENST00000455755 950 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 PNPLA4P1-201ENST00000458328 305 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC009120.1-201ENST00000493458 473 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 DYNLL1P6-201ENST00000503440 264 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC118465.1-201ENST00000513820 1271 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 OR4A2P-201ENST00000527276 913 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC090424.1-201ENST00000535243 736 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AL442163.2-201ENST00000553912 710 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC087465.1-201ENST00000560574 245 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC115085.1-201ENST00000588924 229 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC006115.2-201ENST00000596823 202 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AP003973.1-201ENST00000604639 691 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC016769.4-201ENST00000616893 535 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 AC018445.2-201ENST00000622987 260 ntBASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC144BQ3MJ40 LINC02019-201ENST00000608605 2060 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 TRIM51GP-201ENST00000534741 1350 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 RNU6-83P-201ENST00000384568 112 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 GTF2IP23-201ENST00000423746 351 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 MRPS21P2-201ENST00000424704 264 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AL008629.1-201ENST00000438615 184 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AL663074.2-201ENST00000440621 479 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC023141.8-201ENST00000442554 208 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 RPS27AP15-201ENST00000447672 466 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 UBA52P7-201ENST00000486088 380 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms