Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.99□□□□□ -1.77
USF2Q15853 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.99□□□□□ -1.77
USF2Q15853 MIR6768-201ENST00000610734 72 ntBASIC3.99□□□□□ -1.77
USF2Q15853 AC108359.1-201ENST00000616451 1211 ntBASIC3.99□□□□□ -1.77
USF2Q15853 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.99□□□□□ -1.77
USF2Q15853 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USF2Q15853 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
USF2Q15853 AC017007.4-201ENST00000503353 1352 ntBASIC3.99□□□□□ -1.77
USF2Q15853 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USF2Q15853 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
USF2Q15853 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
USF2Q15853 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.98□□□□□ -1.77
USF2Q15853 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.98□□□□□ -1.77
USF2Q15853 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USF2Q15853 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USF2Q15853 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.98□□□□□ -1.77
USF2Q15853 U3.3-201ENST00000362986 216 ntBASIC3.98□□□□□ -1.77
USF2Q15853 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
USF2Q15853 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
USF2Q15853 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USF2Q15853 U3.32-201ENST00000408116 212 ntBASIC3.98□□□□□ -1.77
USF2Q15853 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.98□□□□□ -1.77
USF2Q15853 AC013404.1-201ENST00000413068 249 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AL732292.1-201ENST00000426692 226 ntBASIC3.98□□□□□ -1.77
USF2Q15853 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USF2Q15853 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.98□□□□□ -1.77
USF2Q15853 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USF2Q15853 AL353093.1-201ENST00000441292 436 ntBASIC3.98□□□□□ -1.77
USF2Q15853 RPL5P32-201ENST00000454085 879 ntBASIC3.98□□□□□ -1.77
USF2Q15853 RPL23AP2-201ENST00000471227 466 ntBASIC3.98□□□□□ -1.77
USF2Q15853 STRADBP1-201ENST00000478954 1281 ntBASIC3.98□□□□□ -1.77
USF2Q15853 RPL7P6-201ENST00000480903 738 ntBASIC3.98□□□□□ -1.77
USF2Q15853 DEFB109F-201ENST00000491870 277 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AC005412.2-201ENST00000492004 341 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.98□□□□□ -1.77
USF2Q15853 AL136038.1-201ENST00000497246 351 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AC020593.1-201ENST00000507399 299 ntBASIC3.98□□□□□ -1.77
USF2Q15853 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.98□□□□□ -1.77
USF2Q15853 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.98□□□□□ -1.77
USF2Q15853 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.98□□□□□ -1.77
USF2Q15853 RNA5SP249-201ENST00000516127 99 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AC012400.1-201ENST00000518452 381 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.98□□□□□ -1.77
USF2Q15853 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.98□□□□□ -1.77
USF2Q15853 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.98□□□□□ -1.77
USF2Q15853 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.98□□□□□ -1.77
USF2Q15853 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.98□□□□□ -1.77
USF2Q15853 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.98□□□□□ -1.77
USF2Q15853 AC068020.1-201ENST00000594215 661 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.98□□□□□ -1.77
USF2Q15853 AC130352.1-201ENST00000602979 661 ntBASIC3.98□□□□□ -1.77
USF2Q15853 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.98□□□□□ -1.77
USF2Q15853 AP005131.7-201ENST00000610087 611 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AC243654.2-201ENST00000612843 443 ntBASIC3.98□□□□□ -1.77
USF2Q15853 WBP1LP8-201ENST00000617401 327 ntBASIC3.98□□□□□ -1.77
USF2Q15853 AC005840.5-201ENST00000619166 599 ntBASIC3.98□□□□□ -1.77
USF2Q15853 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USF2Q15853 AC068254.2-201ENST00000623938 3577 ntBASIC3.98□□□□□ -1.77
USF2Q15853 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.98□□□□□ -1.77
USF2Q15853 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.98□□□□□ -1.77
USF2Q15853 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USF2Q15853 AP001486.2-201ENST00000561652 5113 ntBASIC3.98□□□□□ -1.77
USF2Q15853 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
USF2Q15853 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USF2Q15853 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USF2Q15853 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
USF2Q15853 XIAPP3-201ENST00000312918 795 ntBASIC3.97□□□□□ -1.77
USF2Q15853 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USF2Q15853 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.97□□□□□ -1.77
USF2Q15853 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.97□□□□□ -1.77
USF2Q15853 RN7SKP126-201ENST00000411143 300 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.97□□□□□ -1.77
USF2Q15853 VN1R37P-201ENST00000419096 748 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.97□□□□□ -1.77
USF2Q15853 CHEK2P5-201ENST00000423877 246 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.97□□□□□ -1.77
USF2Q15853 OR6C71P-201ENST00000432580 913 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.97□□□□□ -1.77
USF2Q15853 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USF2Q15853 RPS26P41-201ENST00000450370 284 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AC093166.2-201ENST00000455969 1017 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.97□□□□□ -1.77
USF2Q15853 AC091180.1-201ENST00000462104 372 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AC018635.1-201ENST00000468292 1030 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.97□□□□□ -1.77
USF2Q15853 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USF2Q15853 AC027308.1-201ENST00000517993 110 ntBASIC3.97□□□□□ -1.77
USF2Q15853 SEC11B-201ENST00000518383 499 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USF2Q15853 AC027281.1-201ENST00000574178 758 ntBASIC3.97□□□□□ -1.77
USF2Q15853 SS18L2P2-201ENST00000583960 235 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 AC093765.1-201ENST00000603758 881 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms