Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 RNA5SP22-201ENST00000365393 109 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AL451139.1-201ENST00000434718 346 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 CREM-220ENST00000463314 964 ntTSL 2 BASIC2.68□□□□□ -1.98
HSPG2P98160 AL592156.1-201ENST00000508758 304 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 IGKV2D-19-201ENST00000523346 262 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.68□□□□□ -1.98
HSPG2P98160 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 MIR7853-201ENST00000584820 132 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AL592436.1-201ENST00000605135 558 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 OR7A19P-201ENST00000608051 733 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 MIR30B-201ENST00000384850 88 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AL035079.1-201ENST00000405210 287 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 AC245052.5-201ENST00000416320 649 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 NPM1P18-201ENST00000434232 732 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AL355852.1-201ENST00000454081 1771 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC2.68□□□□□ -1.98
HSPG2P98160 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC2.68□□□□□ -1.98
HSPG2P98160 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.68□□□□□ -1.98
HSPG2P98160 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC2.68□□□□□ -1.98
HSPG2P98160 AC023762.1-201ENST00000603280 584 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AL354798.1-201ENST00000622505 329 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 AC074029.4-201ENST00000624796 1859 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.67□□□□□ -1.98
HSPG2P98160 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 ADAD1P2-201ENST00000588476 646 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 FP236240.3-201ENST00000623061 327 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 AC006058.1-201ENST00000568686 5067 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC2.67□□□□□ -1.98
HSPG2P98160 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 MARK2P15-201ENST00000432204 2186 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HSPG2P98160 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.67□□□□□ -1.98
HSPG2P98160 RPL6P9-201ENST00000466502 859 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.67□□□□□ -1.98
HSPG2P98160 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.67□□□□□ -1.98
HSPG2P98160 MIR5684-201ENST00000585074 65 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 AL159169.3-201ENST00000608871 561 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 ERCC6-202ENST00000374127 1782 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 AC023632.6-201ENST00000624338 2177 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 DHX9P1-201ENST00000436565 3076 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 AL512326.1-201ENST00000443050 721 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 AP001486.1-201ENST00000463339 476 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 AC098799.1-201ENST00000504752 800 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 WBP1LP4-201ENST00000505043 344 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC2.67□□□□□ -1.98
HSPG2P98160 AC087477.6-201ENST00000559595 843 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC2.67□□□□□ -1.98
HSPG2P98160 AC008013.2-202ENST00000637965 364 ntBASIC2.67□□□□□ -1.98
HSPG2P98160 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 NACA-203ENST00000454682 6629 ntTSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HSPG2P98160 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
HSPG2P98160 AC068733.2-201ENST00000605434 1418 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC2.66□□□□□ -1.98
HSPG2P98160 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 Y_RNA.510-201ENST00000384511 114 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 NPM1P26-201ENST00000426339 738 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 OR6C71P-201ENST00000432580 913 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms